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Optical and Atomic Force Microscopy for analysis of wet sediments from the Canale dei Navicelli. LIFE 12 ENV IT 000652 Cleansed. Analysis with Optical Microscopy (shape, size, granulometry) Analysis with scanning probe by AFM (Atomic Force Microscope). Two methods.
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Optical and Atomic Force Microscopy for analysis of wetsedimentsfrom the Canale dei Navicelli LIFE 12 ENV IT 000652 Cleansed
Analysis with Optical Microscopy (shape, size, granulometry) • Analysis with scanning probe by AFM (Atomic Force Microscope) Twomethods
Biologicalmicroscope with high-resolution(16 Mpixel) reflex on trinocular tube for digitalimaging Software: ImageJ(developed by the National Institute of Health): for quantitative analysis (realdimensions-pixel, particlecounting) HeliconFocus Pro: for image stacking (to increase the depth of field) Optical Microscopy
NanosurfEasyscan 2 Microscope • Scanning head: 110*110 micron • Maximum Z range: 22 micron • Maximum resolution: 2048*2048 pixel AFM Microscopy
The texture has great importance for the physical and biological properties of the soil • Classification (USDA): • clay, diameter less than 2 micron • silt, diameter between 2 and 50 micron • sand, between 50 micron and 2 mm. Granulometry
Sample 1 Total counting: 4002 Sample 3 Total counting: 2005
Sample 5 Total counting: 2013 Sample 7 Total counting: 3442
Sample 1 Cyclotella Meneghiniana (MC) Cyclotella Meneghiniana (Moder. Cont.) Staurastrum anatinum (MC)
Sample 1 Cyclotella Meneghiniana (MC) Melosira Varians (MC) Melosira Moniliformis (MC) Navicula Rhyncotella (MC)
Sample 1 Cyclotella Meneghiniana (MC) Melosira Moniliformis (MC) Cyclotella Meneghiniana (MC) Bacillaria Paxillifer (MC to HC)
Sample 1 AFM measurements of sedimentary rock composed by centric
Sample 1 AFM: trace of diatom (Nitzschia Acicularis (MC to HC))
Sample 3 Surirella Brebissonii (MC) Nitschia Sublinearis (MC to HC) Gyrosigma Nodiferum (MC)
Sample 3 AFM: trace of diatom (Phase contrast)
Sample 3 AFM: trace of diatom
Sample 3 AFM: trace of diatom Zoom at 45 micron
Sample 7 Fragilaria Acus (SC) Fragilaria Acus (SC)
Sample 7 In some cases the AFM cantilever can displace a diatom: Before: After: