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By Aimee Stewart, J.H. Beach, C.J. Grady, J. Cavner University of Kansas Biodiversity Institute

Lifemapper: A Web-services Architecture for Integrating Collections into Broader Research Communities. By Aimee Stewart, J.H. Beach, C.J. Grady, J. Cavner University of Kansas Biodiversity Institute. http:// www.lifemapper.org. Lifemapper brings together …. Biodiversity Inventory.

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By Aimee Stewart, J.H. Beach, C.J. Grady, J. Cavner University of Kansas Biodiversity Institute

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  1. Lifemapper: A Web-services Architecture for Integrating Collections into Broader Research Communities By Aimee Stewart, J.H. Beach, C.J. Grady, J. Cavner University of Kansas Biodiversity Institute http://www.lifemapper.org

  2. Lifemapper brings together … Biodiversity Inventory (Macro) Ecological Modeling Global Climate Change

  3. Integrate & Catalog for Transparent, Repeatable Science Work Flow Tools Integration Repeatable Transparent Science Archiving Ellison, A. 2010. J. Ecology EEML

  4. Lifemapper Services Web Services QuantumGIS Metadata Analysis VisTrails Data Internet Specify Narrative Visualization

  5. Lifemapper Back-end Pipeline Data Archive Compute Resources

  6. Back-end Software

  7. Lifemapper Front-end Software Internet SHP GTIFF <EML> ISO 19115 REST Standards

  8. Lifemapper Relationships Research Client/Server Clients Servers

  9. Specify Client

  10. Lifemapper Tools LmSDM: Species Distribution Modeling Modeling & Analysis LmRAD: Range and Diversity

  11. LmSDM:Species Distribution Modeling Species Occurrence Data SDM Modeling Algorithm Predicted Habitat Environmental Data

  12. LmRAD:Range and Diversity Presence Absence Matrix (PAM) Species Habitat Data Range and Diversity Quantifications

  13. Metadata!!! • Repeatability and Reproducibility • Process metadata • Extended EML • Describes steps / workflow • Read by EML-Reader • Transformed into Narratives

  14. http://www.youtube.com/watch?v=VCFixtqlimg

  15. New Directions • With UNM EDAC and UTEP Cyber-ShARE • Extend environmental layers to NASA data • Provenance between EDAC and LM services • SDM of fossil invertebrates • Advanced 3-d viz using GPUs and openGL • Identify location based on species

  16. Take home! • Web services exposing tools and data • Species Distribution Modeling • Range and Diversity • Standards allowing mix and match • Clients simplifying access • Metadata simplifying re-execution • Collaborations making us happy

  17. Lifemapper funded by: U.S. National Science Foundation NSF EPSCoR 0553722 NSF EPSCoR 0919443 EHR/DRL 0918590 BIO/DBI 0851290 OCI/CI-TEAM 0753336 http://www.lifemapper.org astewart@ku.edu

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