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Chapter 4

Chapter 4. Methods of Inference ?????. 4.1 Deductive and Induction ???????. Deduction( ?? ): Logical reasoning in which conclusions must follow from their premises. Induction( ?? ): Inference from the specific case to the general. Intuition( ?? ): No proven theory.

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Dynamic Programming (DP)

Dynamic Programming (DP). Three Steps: Initialization Matrix fill (scoring) Traceback (alignment) Global Alignment: Needleman-Wunsch Local Alignment: Smith-Waterman. G A A T T C A G T T A (sequence #1) G G A T C G A (sequence #2). http://www.avatar.se/molbioinfo2001/dynprog/dynamic.html.

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Similarity Search: A Matching Based Approach

Similarity Search: A Matching Based Approach. Rui Zhang The University of Melbourne July 2006. Outline. Traditional approach to similarity search Deficiencies of the traditional approach Our proposal: the n-match query Algorithms to process the n-match query Experimental results

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163 views • 15 slides

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Chapter 4

Dynamic Programming (DP)

Similarity Search: A Matching Based Approach