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Assembly of Paired-end Solexa Reads by Kmer Extension using Base Qualities

Assembly of Paired-end Solexa Reads by Kmer Extension using Base Qualities. Zemin Ning The Wellcome Trust Sanger Institute. Outline of the Talk:. Euler Path and Sequence Reconstruction Euler Hash Table Read Extension Using Base Qualities and Read Pairs

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393 views • 28 slides

Large Plant Genome Assemblies using Phusion2

Large Plant Genome Assemblies using Phusion2. Zemin Ning The Wellcome Trust Sanger Institute. NGS Data. Assembly. Phusion2 Assembly Pipeline. Scaffolding Spinner. Mate Pair Reads 2k-40k. Pair End Reads 170-800bp. Consensus Bases Smalt & Gap5. Filtering Unikalow. Fermi.

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470 views • 27 slides

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Averaged contig size 1 - PowerPoint PPT Presentation

Assembly of Paired-end Solexa Reads by Kmer Extension using Base Qualities

Large Plant Genome Assemblies using Phusion2