'Binding motif' diaporamas de présentation

Projects 2016-17

Projects 2016-17. Instructions for the final project Introduction to Bioinformatics 2016-17. Key dates 19.12 lists of suggested projects published * *You are highly encouraged to choose a project yourself or find a relevant project which can help in your research

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Motif Search

Motif Search. What are Motifs. Motif (dictionary) A recurrent thematic element, a common theme. Find a common motif in the text. Find a short common motif in the text. Motifs in biological sequences.

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Class I pathway Prediction of proteasomal cleavage and TAP binding

Class I pathway Prediction of proteasomal cleavage and TAP binding. Outline. MHC class I epitopes Antigen processing Proteasome Specificity and Polymorphism Prediction methods TAP Binding motif Evolution Immune escape. Peptide generation in the class I pathway. Proteasomal cleavage.

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Class I pathway Prediction of proteasomal cleavage and TAP binidng

Class I pathway Prediction of proteasomal cleavage and TAP binidng. Can Ke?mir, TBB, Utrecht University, NL & CBS, BioCentrum, DTU. Outline. MHC class I epitopes Antigen processing Proteasome Specificity and Polymorphism Prediction methods TAP Binding motif Evolution Immune escape.

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T cell Epitope predictions using bioinformatics (Hidden Markov models)

T cell Epitope predictions using bioinformatics (Hidden Markov models). Morten Nielsen, CBS, BioCentrum, DTU. Anchor positions. MHC class I with peptide. http://www.nki.nl/nkidep/h4/neefjes/neefjes.htm. How to predict MHC binding?. Structure based Molecular dynamics

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HLA-A2 61 peptides

Supplemental Fig. S1 Icelogo plots of HLA-A2, HLA-B7 and HLA-B44 binding peptides of 8-14 mer length and Icelogo plots of HLA-C binding peptides of 8-11 mer length. Peptides of different length clearly display a similar binding motif. HLA-A2 61 peptides. HLA-A2 3302 peptides.

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The Hidden Codes That Shape Protein Evolution ----Exons Binding Transcription Factor

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Solexa tag analysis

Solexa tag analysis. 0620 ahsan. ?????. ???????? Upload ?? ??????? keyword ????? Distance20 ?? tag40 ?? cluster ??????? Cluster ??? TSS ??? core promoter ??? motif ?? Core promoter motif ?? module ??? Annotation TSS ???? TSS ??? Annotation TSS ?? cluster ??????.

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HIV-1 p6 (31- 46) constructs Binding to Alix

A. HIV-1 p6 (31- 46) constructs Binding to Alix 31 I D K E L Y P L T S L R S L F G 46 A - - - - - - - - - - - - - - - - A - - - - - - - - - - - - - - - - A - - - - - - - - - - - - - - - - A - - - - - - - - - - - -

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