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Pairwise sequence Alignment

Pairwise sequence Alignment. Sequence Alignment. Sequence analysis is the process of making biological inferences from the known sequence of monomers in protein, DNA and RNA polymers. Complete DNA Sequences. More than 400 complete genomes have been sequenced. Evolution. Sequence alignment.

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1.28k views • 98 slides

Bioinformatics ICES 2006

Bioinformatics ICES 2006. Molecular Evolution Revised 29/12/06. Phylogeny is the inference of evolutionary relationships All forms of life share a common origin. deduce the correct trees for all species of life

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521 views • 37 slides

Likelihood methods

Likelihood methods. Given a particular model of evolution , we can estimate phylogenies using maximum likelihood. Likelihood with a coin. data ( D ). HHTTHTHHTHHTTT. L = Prob ( HHTTHTHHTHHTTT | p ) = p p (1-p ) (1-p ) p (1-p ) p p (1-p ) p p (1-p ) (1-p ) (1-p). = p 5 (1-p) 6.

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269 views • 14 slides

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Different lineages - PowerPoint PPT Presentation

Pairwise sequence Alignment

Bioinformatics ICES 2006

Likelihood methods