'Illumina' diaporamas de présentation

Next Generation Sequencing

Next Generation Sequencing. Sequencing techniques. ChIP-seq MBD-seq (MIRA-seq) BS-seq RNA-seq miRNA-seq. ChIP-seq. ChIP-Seq is a new frontier technology to analyze in vivo protein-DNA interactions. ChIP-Seq

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PAVE Overview

PAVE Overview. www.plantrhizomes.org/progress.html. 454 MSU. Illumina NCGR. Assemblies. 454+Ilm RedRice(OlR). Need to compute Illimina low coverage (~singletons) from exp level. Total 454: 17,624 Total Illumina: 21,083. 454+Ilm Ginger ( ZoR ). PAVE assembler.

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Bioinformatics Lectures at Rice

Bioinformatics Lectures at Rice. Lecture 2: High throughput technologies in genomics By Li Zhang. Microarrays. Biology: The biological problems Technology: Microarray mechanism; experimental procedures Statistical methods: data analysis, checking quality, exploration, discovery.

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Assay Development Breakout (red)

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Ingenious strategy

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Third generation sequencing & Comparison of NGS Technology Platforms

Third generation sequencing & Comparison of NGS Technology Platforms. Sravanthi Joginipelli. Available NGS technology platforms. Three commercially available NGS platforms, i.e. Second generation sequencing technologies 1. Roche (454) FLX Genome Sequencer, 2. Illumina Genome Analyzer II

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The MRPS30 eQTL replicates in a validation cohort

The 5p12 breast cancer susceptibility locus is associated with MRPS30 expression in estrogen-receptor positive tumors. San Antonio Breast Cancer Symposium December 4-8, 2012.

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Digital gene expression method. RNA. 1. AAAAAAAAA. Oligo ( dT ) beads. TTTTTTTTT. 2. AAAAAAAAA. TTTTTTTTT. 3. cDNA. AAAAAAAAA. TTTTTTTTT. Nla III. Nla III. 4. AAAAAAAAA. TTTTTTTTT. 5. AAAAAAAAA. TTTTTTTTT. 6. AAAAAAAAA. TTTTTTTTT. Mme I. 7. AAAAAAAAA. TTTTTTTTT.

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