'Nucleic acids research' diaporamas de présentation

Directions in Open Science

Directions in Open Science. Mike Travers SRI Bioinformatics Research Group. For AIC Lunch and Learn, 30 Jan 2012. About this talk . Partly a trip report from Open Science Summit 2011 Partly an attempt to define open science and explore its impact

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Lecture 6 Introduction to transcriptional networks Microarray experiments MA plots

Lecture 6 Introduction to transcriptional networks Microarray experiments MA plots Normalization of microarray data Tests for differential expression of genes Multiple testing and FDR. Central dogma of molecular biology. transcriptional networks.

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Data Presentation: How to Effectively Communicate Your Findings

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Kolmogorov Complexity for analysis of DNA sequence

Kolmogorov Complexity for analysis of DNA sequence. Shijun Tang Thiraphat Meesumrarn Gaith Albadarin. Outline. Kolmogorov Complexity The Complexity of DNA Methods Quantum Kolmogorov Complexity Qubit and Definition of QKC. Kolmogorov Complexity.

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Cataloguing and predicting protein-protein interaction Bioe144/244 Lecture 2

Example physical interaction of two proteins http://www.odec.ca/. Yeast PPI network www.math.cornell.edu/~durrett/RGD/RGD.html. Cataloguing and predicting protein-protein interaction Bioe144/244 Lecture 2. Database of Interacting Proteins (DIP)

745 views • 39 slides

Improving Gene Function Prediction Using Gene Neighborhoods

Improving Gene Function Prediction Using Gene Neighborhoods. Kwangmin Choi Bioinformatics Program School of Informatics Indiana University, Bloomington, IN. Introduction : PLATCOM (A Platform for Computational Comparative Genomics).

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Basic reading, writing and informatics skills for biomedical research

Basic reading, writing and informatics skills for biomedical research. Segment 4. Other types of database and browser. Biological databases. A database is an indexed collection of information Some databases contain mainly text, but others contain image, sequence or structural data

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Predictive Methods Using Protein Sequences Unit 23

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RNAseq

RNAseq. RNA- Seq Alignment. RNA- seq reads. Illumina sequencing. mRNA. 35bp - 150bp s ingle or paired-end reads. transcriptome. Sequencing and Alignment. RNA- seq reads. Illumina sequencing. mRNA. 35bp - 150bp s ingle or paired-end reads. transcriptome. MapSplice.

730 views • 30 slides

Computer-aided Vaccine and Drug Discovery G.P.S. Raghava

Understanding immune system Breaking complex problem Adaptive immunity Innate Immunity Vaccine delivery system ADMET of peptides . Annotation of genomes Searching drug targets Properties of drug molecules Protein-chemical interaction Prediction of drug-like molecules.

538 views • 29 slides

International Law Resources for Science, Education and Business

International Law Resources for Science, Education and Business. Oxford University Press. Hannah Dernie Oxford University Press, Oxford Journals . April 2010. Contents. The Dreaming Spires!. Welcome to OUP. Oxford University Press is a department of the University of Oxford

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RNA Processing Data Analysis Lisa Bloomer Green April 26, 2010

RNA Processing Data Analysis Lisa Bloomer Green April 26, 2010. RNA Processing Data Analysis. Real Time PCR Splicing The Problem Solving the Simplified Problem Making it Complicated Again. Real-time PCR. DNA is copied again and again for exponential growth in quantity present.

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cis -regulatory element study in transcriptome

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A Web-based Software Tool for Designing Small Interface RNA

A Web-based Software Tool for Designing Small Interface RNA. Blake Adams Graduate Student Department of Computer Science Advisor: Dr. Muhammad A. Rahman. Overview. Central Dogma of Molecular Biology Gene Silencing siRNA P2X3 Rational Design Thermodynamics

356 views • 21 slides

DNA Hybridization Detection - Electrochemiluminescence based DNA biosensor - DNA microarray

DNA Hybridization Detection - Electrochemiluminescence based DNA biosensor - DNA microarray. Minjeong So Chem 395. Outline. Basic DNA and Hybridization Electrochemiluminescence(ECL) based DNA biosensor - DNA hybridization detection at high amplification with

1.14k views • 18 slides

Protein Arrays

Protein Arrays. By: Nicole Therrien. Overview. What Are Protein Arrays? General Scheme Types of Arrays Analytical In-depth Example Functional Overview Example Reverse Phase Overview Example. What Are Protein Arrays?. Similar to DNA microarrays Plate, Probe, Attachment Advantage

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Characterisation of the breakpoints of Low-Density Lipoprotein (LDL) Receptor gene deletions in families with familial h

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NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes

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Protein Analysis (Beyond BLAST)

Protein Analysis (Beyond BLAST). Basic Protein Data (MW, pI) Generalized Features Multiple Sequence Alignments Fingerprints, Profiles, Domains Using Structure. Multiple Sequence Alignments Comparison of Methods. DIALIGN.

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Measuring Selection in RNA . Naila Mimouni, Rune Lyngsoe and Jotun Hein

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