'Optimal alignment score' diaporamas de présentation

Pairwise sequence alignment

Pairwise sequence alignment. Based on presentation by Irit Gat-Viks, which is based on presentation by Amir Mitchel, Introduction to bioinformatics course, Bioinformatics unit, Tel Aviv University. and of Benny shomer, Bar-Ilan university. Where we are in the course?.

1.11k views • 61 slides

Pairwise sequence alignment

Pairwise sequence alignment. Based on presentation by Irit Gat-Viks, which is based on presentation by Amir Mitchel, Introduction to bioinformatics course, Bioinformatics unit, Tel Aviv University. and of Benny shomer, Bar-Ilan university. Where we are in the course?.

1.14k views • 61 slides

Pairwise sequence alignment

Pairwise sequence alignment. Based on presentation by Irit Gat-Viks, which is based on presentation by Amir Mitchel, Introduction to bioinformatics course, Bioinformatics unit, Tel Aviv University. and of Benny shomer, Bar-Ilan university. Where we are in the course?.

649 views • 61 slides

Outline

Outline. The fundamental impartance of Alignment and Statistics The Basic Sequence Similarity Algorithm Heuristics: BLAST, FASTA, SIM4 ESTomics. A story. The GOLD-BUG. By Edgar A. Poe. The Gold-Bug, By Edgar A. Poe. Mr. William Legrand, left New Orleans and

648 views • 54 slides

508 views • 44 slides

Intro to Alignment Algorithms: Global and Local

Algorithmic Functions of Computational Biology Professor Istrail. Intro to Alignment Algorithms: Global and Local. Algorithmic Functions of Computational Biology Professor Istrail. Sequence Comparison. Biomolecular sequences DNA sequences (string over 4 letter alphabet {A, C, G, T})

437 views • 35 slides

Devising a scoring system

DNA Properties and Genetic Sequence Alignment CSE, Marmara University mimoza.marmara.edu.tr/~m.sakalli/cse546 Nov/8/09. Devising a scoring system. Importance: Scoring matrices appear in all analysis involving sequence comparison.

472 views • 34 slides

Intro to Alignment Algorithms: Global and Local

Algorithmic Functions of Computational Biology Professor Istrail. Intro to Alignment Algorithms: Global and Local. Algorithmic Functions of Computational Biology Professor Istrail. Sequence Comparison. Biomolecular sequences DNA sequences (string over 4 letter alphabet {A, C, G, T})

304 views • 30 slides

Dynamic Programming: BLAST

428 views • 27 slides

Definitions

Definitions. Optimal alignment - one that exhibits the most correspondences. It is the alignment with the highest score . May or may not be biologically meaningful.

266 views • 25 slides

Definitions

Definitions. Optimal alignment - one that exhibits the most correspondences. It is the alignment with the highest score . May or may not be biologically meaningful.

307 views • 25 slides

CISC 667 Intro to Bioinformatics (Spring 2007) Sequence pairwise alignment

CISC 667 Intro to Bioinformatics (Spring 2007) Sequence pairwise alignment. Score statistics: E-value and p-value Heuristic algorithms : BLAST and FASTA Database search : gene finding and annotations. Significance of scores Goals for sequence alignments: (1) whether and

326 views • 21 slides