'Www expasy' diaporamas de présentation

Prediction of protein structure

Prediction of protein structure. aim. Structure prediction tries to build models of 3D structures of proteins that could be useful for understanding structure-function relationships. Genbank/EMBL 105.000.000 Uniprot 5.200.000 PDB 47.000. DNA sequence. Protein sequence.

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Protein sequence analysis

Protein sequence analysis. Xu Cheng. Knowing what you must about domains, HMMs, profiles, and the Pfam domain collectionVisiting the three most popular sites for finding domains in your protein Predicting simple physical properties of your sequences

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Chem/Biol 474 W 2009

Chem/Biol 474 W 2009. Instructors: M/W Gerry Prody CB 444 gerry@chem.wwu.edu Scott Delbec Delbecs@cc.wwu.edu T/R Clint Spiegel CB 443 spiegel@wwu.edu Peter Littlefield. Course Overview. Lab Notebooks. Prelab/Research Project/Paper. Lab Etiquette.

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5 alpha reductase and its role in male pattern baldness

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Bioinformatics Part 2: The Primary Databases

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Practice (sort of...)

Practice (sort of...). http://weblogo.berkeley.edu/. Graphical representation of an amino acid or nucleic acid multiple sequence alignment developed by Tom Schneider and Mike Stephens. Exercise: Identify conserved motif in the 50 bases upstream of 350 E. coli genes . Results. MOTIF Search.

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Mus musculus - a model organism in SWISS-PROT

Mus musculus - a model organism in SWISS-PROT. SWISS-PROT. Curated protein sequence data bank established in 1986 by Amos Bairoch in Geneva and maintained collaboratively with EMBL since 1987 Contains currently >74 000 protein sequence entries (Release 36). Distinguishing features.

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Exercises Proteomics IV

Exercises Proteomics IV. Exercise 1

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