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Phenote: Java-based Curation Tool for Ontologies

Phenote is a Java-based curation tool with a spreadsheet-like interface supporting .obo ontologies, developed by the Bioinformatics Core of the NCBO. Used for WormBase, Flybase, Zfin, and mouseBIRN funded projects by Mark Gibson. This tool allows easy querying, term completion, view windows, multiple value selection, entity/quality/post composition, object duplication, and ontology curation for GO and interactions.

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Phenote: Java-based Curation Tool for Ontologies

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  1. Java-based curation tool with a spreadsheet-like interface Supports .obo ontologies Developed by the Bioinformatics Core of the National Center for Biomedical Ontology (NCBO) Funded by Flybase, Zfin, and mouseBIRN Developed mainly by Mark Gibson SAB 2008

  2. Phenote for WormBase SAB 2008

  3. Type object name into field and click Retrieve to query postgreSQL SAB 2008

  4. .obo ontologies allow Term completion and view on Term Info window SAB 2008

  5. Multiple value selection from ontologies SAB 2008

  6. Entity / Quality and Post Composition SAB 2008

  7. Easily duplicate objects SAB 2008

  8. Select multiple characters (rows / objects) and change values for selection SAB 2008

  9. Phenote for GO curation SAB 2008

  10. Phenote for Interaction curation SAB 2008

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