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This study delves into the structure and function of exons in the HBZ gene, focusing on Exon 1 and Exon 2. We investigate the sequences and splicing patterns identified, including key elements such as the 5' and 3' untranslated regions (UTRs) and their significance in gene expression. The implications of these findings for understanding viral replication and pathogenesis are discussed. We also compare the generated sequences with those from various cell lines, providing a comprehensive overview of HBZ functionality in HIV-positive environments.
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A B Exon 2 Exon 1 20-19 21-5 SA (1767) SD (367) SP1 M A A S G L F HBZ (SP1) AUGGCGGCCUCAG GGCUGUUU SD (227) SA (1767) V E S R L S L G L F V R Q S T S R - HBZ (SP2) SP2 UGAACAAGCAGGGUCAGGCAAAGCGUGGAGAGCCGGCUGAGUCUAG GGCUGUUU M V N F V S V G L F HBZ (unspliced) HBZ AUGGUUAACUUUGUAUCUGUAG GGCUGUUU 3’ LTR 293T D C K30-3’/5681 C8166-45 M ACH K30 MJ Jas081 YB356 YB034 YB096 YB138 YB167 YB178 YB186 YB271 YB349 MT4 1P8 J1+ *