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http://phenotypercn.wordpress.com/. Me:. PI of TAIR, The Arabidopsis Information Resource Carnegie Institution for Science, located at Stanford, California Background – genetics and developmental biology of Arabidopsis. Plant Working Group. http://phenotypercn.wordpress.com/.

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phenotypercn.wordpress/

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  1. http://phenotypercn.wordpress.com/ Me: PI of TAIR, The Arabidopsis Information Resource Carnegie Institution for Science, located at Stanford, California Background – genetics and developmental biology of Arabidopsis

  2. Plant Working Group http://phenotypercn.wordpress.com/ • Great variety of needs and approaches • Ecology • Systematics • Genetics/genomics • Great variety of species of interest • ‘Model ‘ plants for genetic approaches • Crop plants • Models for ecological studies • Plants of evolutionary interest • Models for population biology • Great enthusiasm!

  3. Plant Working Group - Resources http://phenotypercn.wordpress.com/ • Ontologies • High throughput phenotyping projects • Other Projects • Coordination • Resource development

  4. Plant Resources - Ontologies http://phenotypercn.wordpress.com/ • Plant Ontology • Crop Ontology • Trait Ontology • OBOE / Plant Functional Trait Ontology many others…

  5. Plant Resources – HTP Phenotyping http://phenotypercn.wordpress.com/ • Jülich Plant Phenotyping Center (Germany) • Australian Plant Phenomics Facility • AGRON-OMICS (Europe) • Phenoscope (France)

  6. Plant Resources – Other projects http://phenotypercn.wordpress.com/ • TraitNet (RCN) • International Plant Phenomics Network • iPlant Genotype to Phenotype (iPG2P) • Gigavision (Justin Borevitz, Chicago) Gigavision

  7. Plant Working Group – Questions http://phenotypercn.wordpress.com/ • Large and diverse group of researchers with lots of active projects • Should we aim for one plant ontology? interoperability? common data formats? • What tools and methods need to be developed? • How much can we share the work of developing them?

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