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Explore the significance of interannual variability in carbon fluxes and learn how modeling using the Sipnet model can enhance understanding. Discover the optimization process, including Markov Chain Monte Carlo, to improve parameter estimation for ecosystem carbon interactions.
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Interannual Variability in the ChEAS Mesonet ChEAS XI, 12 August 2008 UNDERC-East, Land O Lakes, WI Ankur Desai Atmospheric & Oceanic Sciences, University of Wisconsin-Madison
What’s the Deal? • Interannual variation (IAV) in carbon fluxes from land to atmosphere are significant at most flux sites • Key to understanding how climate affects ecosystems comes from modeling IAV • IAV (years-decade) is currently poorly modeled, while hourly, seasonal, and even successional (century) are better
Sipnet • A “simplified” model of ecosystem carbon / water and land-atmosphere interaction • Minimal number of parameters • Driven by meteorological forcing • Still has >60 parameters • Braswell et al., 2005, GCB • Sacks et al., 2006, GCB added snow • Zobitz et al., 2008
2 years = 7 years 1997 1998 1999 2000 2001 2002 2003 2004 2005
Any coherence? Desai et al, 2008, Ag For Met
Cross-site IAV • Hypothesis: IAV in flux towers in the same region are coherent in time • Hypothesis: Simple climate driven models can explain this IAV • Growing season length • Climate thresholds • Mean annual precip
Growing season and IAV • Does growing season start explain IAV? • Can a very simple model be constructed to explain IAV? • Hypothesis: growing season length explains IAV • Can we make a cost function more attuned to IAV? • Hypothesis: MCMC overfits to hourly data
The model • Driven by PAR, Air and Soil T, VPD, (Precip) • LUE based GPP model f(PAR,T,VPD) • Three respiration pools f(T, GPP) • Output: NEE, ER, GPP, LAI • Sigmoidal GDD function for leaf out • Sigmoidal Soil T function for leaf off • 17 parameters, 3 are fixed • Desai et al., in prep (a)
The optimizer • All flux towers with multiple years of data • Estimate parameters with Markov Chain Monte Carlo (smart random walk) • Written in IDL
MCMC • MCMC is an optimizing method to minimize model-data mismatch • Quasi-random walk through parameter space (Metropolis) • Start at many random places (Chains) in prior parameter space • Move “downhill” to minima in model-data RMS by randomly changing a parameter from current value to a nearby value • Avoid local minima by occasionally performing “uphill” moves in proportion to maximum likelihood of accepted point • Use simulated annealing to tune parameter space exploration • Pick best chain and continue space exploration • Requires 100,000-500,000 model iterations (chain exploration, spin-up, sampling) • End result – “best” parameter set and confidence intervals (from all the iterations) • Cost function compared to observed NEE
New cost function • Original log likelihood computes sum of squared difference at hourly timestep • What if we also added monthly and annual squared differences to this likelihood? • Have to scale these less frequent values • Have to deal with missing data
Regional IAV • How well do we know regional (scaled-up) IAV? • Do top-down and bottom-up regional flux estimation techniques agree on IAV (if not magnitude)? • What controls regional IAV? • Wetland IAV vs Upland IAV • Step 1: Scale the towers
Scaling with towers • NEP (=-NEE) at 13 sites • Stand age matters • Ecosystem type matters • Is interannual variability coherent? • Are we sampling sufficient land cover types”?
Desai et al., 2008, AFM • Multi-tower synthesis aggregation • parameter optimization with minimal 2 equation model
Tall tower downscaling • Wang et al., 2006
Scaling evaluation • Desai et al., 2008
Next step • Use our IAV model with all 17 (19) flux towers - estimate parameters for each • Use better landcover and better age distribution from NASA project • Upscale again - this time over long time period • This experiment for Northern Highlands 1989-2007 (Buffam et al., in prep)
Regional coherence? • Desai et al., in prep
Conclusions • There is some coherence in IAV across ChEAS • Better statistical method to show this? • A simple model with explicit phenology can capture the IAV across sites only with a better likelihood function • Next step: Simple model with fixed phenology • Limited convergence on IAV from regional methods
Other things • Sulman et al., in prep - the role of wetlands in regional carbon balance • Lake Superior carbon balance from ABL budgets (Atilla, McKinley) - Urban et al, in prep • Small lakes in the landscape (Buffam, Kratz) • Successional trends and modeling (Dietze) • Hyperspectral remote sensing (Townsend, Serbin, Cook) • Top-down CO2 budgets in valeys and complex terrain (Stephens, Schimel, Bowling, deWekker) • CH4 (pending), advection (pending - Yi), urban micromet and biogeochem (pending) • NEON? (Schimel, UNDERC)
Thanks • Desai lab: http://flux.aos.wisc.edu • Ben Sulman, Jonathan Thom, Shelly Knuth • DOE NICCR, NSF, UW, DOE, NASA, USFS, Northern Research Station, Kemp NRS • All the tower people