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This report presents the findings on in vivo and in vitro cleavage specificities of I-CreI and I-MsoI libraries. It includes the construction of degenerate site libraries, single bp mismatch matrix for I-MsoI, and generation of Mso mutants with higher activity. The study also delves into rational design and bacterial selection in determining the cleavage specificity of mMsoI. Key insights on mutations and target sites are discussed in detail.
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NGEC Progress ReportHui Li, Monnat Group • In vivo and in vitro cleavage specificities • Construction of degenerate site library for I-CreI and I-MsoI I-CreI library: ~ 107 unique sites; 6.8 ± 2.5 mutations/per site I-MsoI library: ~ 5 ×106 unique sites; 8.2 ± 2.1 mutations/per site • Construction of single bp mismatch matrix for I-MsoI In vivo cleavage specificity based on recombination In vitro cleavage specificity • Generation of Mso mutants with higher activity • rational design • bacterial selection
In vitro cleavage specificity of Mso-I Each target site 7.5 nm
In vitro cleavage specificity of mMsoI Each target site 7.5 nm
Rational design of I-MsoI Mutants D81 D146, E147 E147 D146 J. M. B. (2003) 329, 253-269