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Overview of Bioinformatics Exercise Sessions: Practical Application and Techniques

This document outlines a series of bioinformatics exercise sessions conducted by Steven Van Vooren at KU Leuven. The exercises aim to bridge theoretical knowledge with practical application, offering insights into various bioinformatics tools and methods. Participants will engage in hands-on activities, including gene information retrieval, hidden Markov models, gene prediction, clustering expression data, and motif finding. No separate exam will be held; instead, participants should report their findings through email at the end of each session, highlighting teamwork and practical skills.

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Overview of Bioinformatics Exercise Sessions: Practical Application and Techniques

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  1. H0K08A EXERCISE SESSIONS

  2. Exercises - overview • Steven Van Vooren Steven.VanVooren esat.kuleuven.be • Toledo http://toledo.kuleuven.be • Site http://www.esat.kuleuven.be/~svanvoor/bioi/2006/

  3. Exercises - overview • Goal Bring theory into practice, give a more global view of bio-informatics, get in touch with the available tools and methods, hands-on.

  4. Exercises - overview • Exercises: • Exercise 1 Gene information retrieval • Exercise 2 Hidden Markov Models • Exercise 3 Gene Prediction • Exercise 4 Clustering expression data • Exercise 5 Motif finding

  5. Exercises - overview • Reporting and evaluation • no separate exam • report your searches and findings • e-mail a brief report (results, screen shots, source code) at the end of each session • Mail to: svanvoor esat.kuleuven.be • Subject: exercise X • Mention names of team members • Not graded • Will be looked at in case of ‘problems’ during the theoretic exam

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