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Data linking with kblog

Data linking with kblog. Phillip Lord Newcastle University. The Long Tail. http://en.wikipedia.org/wiki/File:La_Palmyre_041-crop.jpg. Example Data. ID_REF VALUE 1007_s_at 2.867330709 1053_at 10.50302152 117_at 2.702517066 121_at 3.052316166 1255_g_at 2.278998026

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Data linking with kblog

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  1. Data linking with kblog Phillip Lord Newcastle University

  2. The Long Tail http://en.wikipedia.org/wiki/File:La_Palmyre_041-crop.jpg

  3. Example Data ID_REF VALUE 1007_s_at 2.867330709 1053_at 10.50302152 117_at 2.702517066 121_at 3.052316166 1255_g_at 2.278998026 1294_at 5.360226024 1316_at 5.496447322 1320_at 4.475412175 1405_i_at 2.301359647

  4. Example Data ID_REF VALUE 1007_s_at 2.867330709 1053_at 10.50302152 117_at 2.702517066 121_at 3.052316166 1255_g_at 2.278998026 1294_at 5.360226024 1316_at 5.496447322 1320_at 4.475412175 1405_i_at 2.301359647

  5. Example Data ID_REF VALUE 1007_s_at 2.867330709 1053_at 10.50302152 117_at 2.702517066 121_at 3.052316166 1255_g_at 2.278998026 1294_at 5.360226024 1316_at 5.496447322 1320_at 4.475412175 1405_i_at 2.301359647

  6. Example Data ID_REF VALUE 1007_s_at 2.867330709 1053_at 10.50302152 117_at 2.702517066 121_at 3.052316166 1255_g_at 2.278998026 1294_at 5.360226024 1316_at 5.496447322 1320_at 4.475412175 1405_i_at 2.301359647

  7. The paper

  8. The problem? http://en.wikipedia.org/wiki/File:Clock_in_Kings_Cross.jpg

  9. The problem? http://en.wikipedia.org/wiki/File:Clock_in_Kings_Cross.jpg • http://en.wikipedia.org/wiki/File:New_British_Coinage_2008.jpg

  10. The problem? http://en.wikipedia.org/wiki/File:Clock_in_Kings_Cross.jpg • http://en.wikipedia.org/wiki/File:New_British_Coinage_2008.jpg

  11. Coach Building • 250,000 articles per year • 240 million Downloads • Cost: 1.5 Billion Euro • Elsevier • 17 million articles • > 20 languages • 365 million readers • Total Cost: 10 million dollars • Wikipedia http://commons.wikimedia.org/wiki/File:Hackney-coach,_about_1680.png

  12. The process

  13. The process

  14. The process

  15. The process

  16. The process

  17. The process

  18. The process

  19. Our Solution

  20. Wordpress • Has one critical feature • It has an edit dialog • Word • Latex • Open Office • Asciidoc • Textile • Markdown • By email

  21. Features • Reviewing • Metadata – coins, metatags * • Crawlability * • Multiple authors • Archiving (UKWA) • Searchability

  22. Features • Bi-directional links • Permalinks (purls to follow) • DOIs (datacite!) • Versioning • Extensibility • Nice maths * (and mathjax) • Syntax Highlighting • Bibliographic Support (with DOIs, and incompletely CiTO) * • ePUB and PDF (!?) export

  23. Data Linking • Bi-directional links require support at both ends • Adding this generically • Adding this for specific data sets (microarray) • Data linking into papers

  24. Old technology • Most of this technology pre-exists • So why don’t people use it! • There is a good reason... • TECHNOLOGY IS BORING

  25. Content • http://ontogenesis.knowledgeblog.org • Now has 15k page views (not hits!) • 25 articles, multiple authors • Seeking pubmed inclusion • Advertising: two blog articles about ontogenesis happened with 1 day of first article. • http://taverna.knowledgeblog.org • 10 articles • About scientific workflows • Supplement to myExperiment

  26. Well... • These stats are not going to scare either Elsevier or Wikipedia • But, they are not bad either • And it allows primary scientific content of many different forms • We believe it can form part of the scientific landscape

  27. Acknowledgements Phillip Lord (me!) Dan Swan Simon Cockell Robert Stevens (Manchester) Georgina Moulton (Manchester) Thanks also to JISC, David Shotton, BL, Datacite, and WordPress.

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