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How to build cross-species interoperable ontologies

How to build cross-species interoperable ontologies

How to build cross-species interoperable ontologies. Chris Mungall, LBNL Melissa Haendel, OHSU. The challenge. There are many fun and interesting issues involved in building and using cross-species ontologies homology evo-devo reasoning using ontologies

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799 views • 66 slides
geneontology

geneontology

Gene Ontology Consortium. http://www.geneontology.org. DictyBase. The Pathogen Group. Schizosaccharomyces pombe Genome Sequencing Project. Extending to the GO model OBO open biology ontologies http://obo.sf.net/

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372 views • 23 slides
geneontology

geneontology

Gene Ontology Consortium. http://www.geneontology.org. DictyBase. The Pathogen Group. Schizosaccharomyces pombe Genome Sequencing Project. Extending to the GO model OBO open biology ontologies http://obo.sf.net/

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238 views • 23 slides
More than one way to dissect an animal

More than one way to dissect an animal

More than one way to dissect an animal. Melissa Haendel ZFIN Scientific Curator. Model organism databases (MODs) use anatomy ontologies for annotation. fruitfly. ama expression in tracheal system, lateral cord. Stages: 13-16. (Seeger et al., 1988). zebrafish. pax2a expression in

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127 views • 12 slides
Developing a Multi-species Anatomy Ontology for Teleost Fishes

Developing a Multi-species Anatomy Ontology for Teleost Fishes

hemal spine. pelvic fin. 1 mm. middle nuchal plate. spinelet. Catfish Pimelodus maculatus. anterior nuchal plate. hemal spine. pelvic fin. Anotophysi. Gonorynchiformes milkfish. Ostariophysi. Cypriniformes zebrafish. Otophysi. Characiformes tetras. Siluriformes

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135 views • 1 slides

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