'Approximation ratio performance guarantee' diaporamas de présentation

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Greedy Algorithms And Genome Rearrangements

Greedy Algorithms And Genome Rearrangements. Genome rearrangements. Mouse (X chrom.). What are the similarity blocks and how to find them? What is the architecture of the ancestral genome? What is the evolutionary scenario for transforming one genome into the other?.

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Greedy Algorithms

Greedy Algorithms. CS 498 SS Saurabh Sinha. Chapter 5.5. A greedy approach to the motif finding problem. Given t sequences of length n each, to find a profile matrix of length l. Enumerative approach O( l n t ) Impractical

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Greedy Algorithms

Greedy Algorithms. CS 498 SS Saurabh Sinha. Genome Rearrangements. Most mouse genes have human orthologs (i.e., share common evolutionary ancestor) The sequence of genes in the mouse genome is not exactly the same as in human

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