'Bioconductor' diaporamas de présentation

Enabling Bioconductor R packages for caGrid services

Enabling Bioconductor R packages for caGrid services. Session Length: approx 30 minutes Target Audience: application developers Trainer: self-paced Developer contact: Martin Morgan ( mtmorgan@fhcrc.org ) Adopter contacts: Pan Du ( dupan@northwestern.edu ),

450 views • 33 slides

Karim Chine karim.chine@cloudera.co.uk Cloud Era Ltd Cambridge - UK

Elastic-R , Toward an International Portal for On-Demand Scientific Computing, Collaboration and Resources Sharing . Karim Chine karim.chine@cloudera.co.uk Cloud Era Ltd Cambridge - UK. ,lingua franca of data analysis.

484 views • 24 slides

midterm project

midterm project. Course: Statistics in Bioinformatics Date:20070430 ???? : ??? ?? : ???. What is BioConductor?. What is BioConductor? As the website saying Bioconductor is an open source and open development software project for the analysis and comprehension of genomic data. Outline.

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Overview of R & Bioconductor

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Pathway analysis using BioConductor

Pathway analysis using BioConductor. The global test revisited. Overview. Introduction Annotation Pathway analysis Demonstration. Introduction. Pathway Set of related genes Functional Structural Described as lists of gene identifiers Micro array 1000s of tests Description

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C:_

1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 17. 18. 19. 20. 21. Copy Number. A NGS Library: Target region capture/quality analysis. B NGS Library: Customized normalization and filtering pipeline. chr 25, 100K windows. chr 25, 10K windows.

166 views • 1 slides