'Blast output' diaporamas de présentation

Advanced BLAST Searching

1.24k views • 61 slides

Advanced BLAST Searching

1.21k views • 61 slides

Advanced BLAST Searching

623 views • 61 slides

BLAST

BLAST. Getting the most from your cycles . Tom Madden NCBI/NLM/NIH madden@ncbi.nlm.nih.gov. The BLAST algorithm. What is BLAST?. B asic L ocal A lignment S earch T ool Calculates similarity for biological sequences.

676 views • 58 slides

Bioinformatics

Bioinformatics. Outline of Presentation Overview of Bioinformatics Introduce methods to access HGP. Goals of HGP. Sequence Human Genome Sequence Genomes from other Species Prokaryotes: Eubacteria & Archaebacteria Eukaryotes: Yeast-Nematode-Fruit Fly-Plant-Humans.

590 views • 35 slides

Genome of the week

Genome of the week. Bacillus subtilis. Gram-positive soil bacterium Genetically tractable, well-studied Developmental pathways (sporulation, genetic competence) Industrial and agricultural importance 4.2 Mb genome (sequence completed 1997) Close relative of Bacillus anthracis (Anthrax).

468 views • 35 slides

Genome of the week

Genome of the week. Bacillus subtilis. Gram-positive soil bacterium Genetically tractable, well-studied Developmental pathways (sporulation, genetic competence) Industrial and agricultural importance 4.2 Mb genome (sequence completed 1997) Close relative of Bacillus anthracis (Anthrax).

353 views • 35 slides

A Tool for Supporting Integration Across Multiple Flat-File Datasets

A Tool for Supporting Integration Across Multiple Flat-File Datasets. Xuan Zhang, Gagan Agrawal Ohio State University. Outline. Motivation System Overview System Implementation Languages Query Execution Experiments. Motivation. Biological researches ask for

377 views • 26 slides

A Tool for Supporting Integration Across Multiple Flat-File Datasets

A Tool for Supporting Integration Across Multiple Flat-File Datasets. Xuan Zhang, Gagan Agrawal Ohio State University. Outline. Motivation System Overview System Implementation Languages Query Execution Experiments. Motivation. Biological researches ask for

326 views • 26 slides

BLAST

262 views • 26 slides

Parsing BLAST output

498 views • 24 slides

B asic L ocal A lignment S earch T ool

B asic L ocal A lignment S earch T ool. BLAST Why Use BLAST?. Finding Model Organisms for Study of Disease. Can yeast be used as a model organism to study cystic fibrosis ?. Model Organisms. Cystic fibrosis is a genetic disorder that affects humans

347 views • 24 slides

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Parsing BLAST output

244 views • 24 slides

Database Similarity Searching

443 views • 23 slides

BINF350, Tutorial 4 Karen Marshall

Blast in practice. BINF350, Tutorial 4 Karen Marshall. Aim. Examine how blast parameters (e.g. scoring scheme, word length) affect the alignment outcome To optimise blast parameters for alignments with different levels of sequence homology. v. Practical: Part 1.

300 views • 22 slides

Development of a Chicken Unigene Database

Development of a Chicken Unigene Database. Project No. 9. Ruoming Jin. Lilian Lacoste. Jianshan Tang . Department of CIS University of Delaware. Animal Science Dept. University of Delaware. DBI - French National School of Aeronautics and Space.

231 views • 11 slides