'Cdnas' diaporamas de présentation

The wonderful complexity of the human transcriptome

Danielle and Jean Thierry-Mieg N.C.B.I. http://www.aceview.org. The wonderful complexity of the human transcriptome. Phenotype and in vivo function, GO biol. proc. Protein family GO molecular function. Gene-gene or Protein protein interactions. Regulation Alt splicing position

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Gene expression

Gene expression. Statistics 246, Week 3, 2002. Thesis: the analysis of gene expression data is going to be big in 21st century statistics. Many different technologies, including High-density nylon membrane arrays Serial analysis of gene expression (SAGE)

639 views • 63 slides

Computational Gene Finding

Computational Gene Finding. Sanja Rogic CS Department UBC. What is Computational Gene Finding?. Given an uncharacterized DNA sequence, find out: Which region codes for a protein? Which DNA strand is used to encode the gene? Which reading frame is used in that strand?

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DNA sequence analysis Gene prediction

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Measuring gene expression via RNA

Northern blot RNase protection Primer extension RT-PCR Q-RT-PCR Microarray RNAseq. Measuring gene expression via RNA. Northern blotting. Denaturing gel for true MW (urea, formamide). Alternative polyadenylation sites ? 2 dhfr mRNAs. http://www.gene-quantification.de/mrna.html#northern.

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Recombinant DNA & Biotechnology

736 views • 45 slides

The Organization of Cellular Genomes Complexity of Genomes Chromosomes and Chromatin Sequences of Genomes Bioinformatics

The Organization of Cellular Genomes Complexity of Genomes Chromosomes and Chromatin Sequences of Genomes Bioinformatics. Introduction to Cellular Genomes. The sequences of many cellular genomes are known: Bacteria Yeast Drosophila Many Plants and Animals Humans

922 views • 36 slides

Genetics and plant breeding in Australia

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Biological Motivation Gene Finding

Biological Motivation Gene Finding. Anne R. Haake Rhys Price Jones. Gene Finding. Why do it? Find and annotate all the genes within the large volume of DNA sequence data how many genes in an organism? homologies? Gain understanding of problems in basic science

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Collective annotation of the Ixodes scapularis genome: VectorBase, MSCs and the tick community.

Collective annotation of the Ixodes scapularis genome: VectorBase, MSCs and the tick community. Daniel Lawson, VectorBase. Arthropod vectors of human pathogens. Lutzomyia Phlebotomus. Glossina. Ixodes. Pediculus. Aedes. Culex. Rhodnius. Anopheles. Deer tick Ixodes scapularis.

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Bioinformatics Workshop 1 Sequences and Similarity Searches

Bioinformatics Workshop 1 Sequences and Similarity Searches. Open a web browser and type in the URL: informatics.gurdon.cam.ac.uk/online/workshops Bookmark this page Click on the link to the file: useful-websites.html Bookmark this page too

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Jamie A. Johansen 1 , D. Ashley Monks 3 , S. Marc Breedlove 1,2 , Cynthia L. Jordan 1,2 1 Neuroscience Program, 2 D

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Genome-Wide SNP Discovery from de novo Assemblies of Pepper ( Capsicum annuum ) Transcriptomes

Mean=1095. Max=19,089. Background and Significance . Results . Molecular breeding of pepper ( Capsicum spp. ) has been hampered by the paucity of molecular markers. This is primarily due to lack of availability of the pepper genome sequence and limited available sequence resources.

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Gene Expression Platforms for Global Co-Expression Analyses

CATG. CATG. CATG. CATG. CATG. CATG. CATG. SAGE

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Figure 7 The cDNA-mediated annealing, selection, extension and ligation (DASL™) assay monitors gene expression by targeting sequences in cDNAs with sets of query oligonucleotides, which are composed of multiple parts.

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