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Microarray Type Analyses using Second Generation Sequencing

Microarray Type Analyses using Second Generation Sequencing. Adam B. Olshen Helen Diller Comprehensive Cancer Center UCSF Division of Biostatistics 5/18/11. Outline. RNA DNA Methylation. RNA. RNA Sequencing Pipeline. Experiment. Map Reads. Summarize Counts. Millions of short reads.

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Supplementary Table 2.

Supplementary Table 2. a The #CpG indicates the number of CpG in the sequence region. b The plus(+) and minus(-) indicate the presence and absence of CpG island, respectively. c The plus(+) and minus(-) indicate the presence and absence of candidate methylated site, respectively.

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Microarray Type Analyses using Second Generation Sequencing

Supplementary Table 2.