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IMGS 2012 Bioinformatics Workshop: RNA Seq using Galaxy

IMGS 2012 Bioinformatics Workshop: RNA Seq using Galaxy. Typical RNA_Seq Project Work Flow. Tissue Sample. Total RNA. mRNA. cDNA. Sequencing. FASTQ file. QC. Visualization. TopHat. Focus for Today. Cufflinks. Gene/Transcript/ Exon Expression. Statistical Analysis.

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547 views • 41 slides

Populus

Populus. Petra van Berkel Casper Gerritsen Astri Herlino Brian Lavrijssen. Dataset and goal. Dataset Organism of choice is S. cerevisiae 2 conditions (batch &amp; chemostat ) Response to glucose limitation 3 replicates per condition Goal Find differentially expressed genes

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298 views • 6 slides

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