'Education blastinfo alignment scores2' diaporamas de présentation

Pairwise sequence alignment

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Pairwise Alignments

Pairwise Alignments. Biology 224 Instructor: Tom Peavy Sept 13 &15. <PowerPoint slides based on Bioinformatics and Functional Genomics by Jonathan Pevsner> . General approach to pairwise alignment. Choose two sequences Select an algorithm that generates a score

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Introduction

APT Solution public class BLASTStageOne { public String stageOne(String query, String[] library, int w) { int topResemblance = 0; String bestResemblance = new String(); for ( int i = 0; i < library. length ; i++) { //explore the entire array int counter = 0;

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