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Computational Gene Finding

Computational Gene Finding

Computational Gene Finding. Greg Voronin Hui Zhao Xueyi(Judy) Xiao. CIS786 Intro to Comp Biol Instructor: Dr. Barry Cohen. The Challenge. Presented By Greg Voronin. Generate predictions of gene locations from primary genomic sequence by computational means Two principle means:

By shaina
(130 views)

Geneid: training on S. lycopersicum

Geneid: training on S. lycopersicum

Geneid: training on S. lycopersicum. Francisco Câmara Ferreira. Genome Bioinformatics Research Lab Center for Genomic Regulation. Tomato Annotation, Ghent October 2006. Geneid:. Geneid follows a hierarchical structure: signal -> exon -> gene.

By lamond
(218 views)

Fungal Genome Size and Intron Evolution

Fungal Genome Size and Intron Evolution

Figures Only, Tables will be in the manuscript word file. Fungal Genome Size and Intron Evolution. Kemin Zhou, Oct 4, 2012. 400. 100. Batde5. ustma1. 350. 300. 80. 250. 200. 60. Sporo1. 150. 100. 40. 50. 0. 20. 40. 60. 80. 100. 0. 20. 40. 60. 80. 100. 0. 20. 40. 60.

By iona
(86 views)

Supplementary Fig. 1

Supplementary Fig. 1

Supplementary Fig. 1. Supplementary Figure 1. Distributions of ( A ) exon and ( B ) intron lengths in O. sativa and A. thaliana genes. Green bars are used for O. sativa and orange bars for A. thaliana .

By zack
(116 views)

Supplementary Fig. 1

Supplementary Fig. 1

Supplementary Fig. 1. Supplementary Figure 1. Distributions of ( A ) exon and ( B ) intron lengths in O. sativa and A. thaliana genes. Green bars are used for O. sativa and orange bars for A. thaliana .

By johnrichard
(1 views)


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Recherches associées pour Exon length
Exon 5

Exon 5

Rivera B 1 , González S 2 , Sánchez-Tomé E 1 , Blanco I 2 , Mercadillo F 1 , Capellá G 2 , Robledo M 3,4 , Benítez J 1,3 , Urioste M 1,3

By nanda (108 views)

Exon 6

Exon 6

Rupp et al. Genomic DNA. Exon 6. Exon 9. Exon 10. cDNA from mRNA. mutation. 302bp. Supplementary Figure 1: Structure of the human troponin T gene.

By aladdin-reese (146 views)

exon 4 exon 5

exon 4 exon 5

Target. Transactivator. X. Mouse with Floxed BMPRII. TRE-P min CMV. CRE. SM 22 a. tTA. SM22 -tTA + /Cre +. CRE. CRE. TRE-P min CMV. TRE-P min CMV. tTA. SM 22 a. exon 4 exon 5. Frt LoxP LoxP. SM 22 a. tTA. Doxycycline. Frt LoxP.

By alize (67 views)

Exon

Exon

Exon. Exon. Exon. Exon. UTR. AUG. Messenger RNA. UTR. Poly-A. Transcription and translation are highly regulated (and highly complex).

By vashon (134 views)

exon

exon

M. AIMRD AIRD AID AIM Other. amersham. antibody. tris. primer. rabbit. R. motor. discrimination. tumour. A. I. lethality. mouse. maze. mutation. iris. impairment. gap. ras. differentiation. development. predisposition. nf1. gtpase. disability. neurofibromin.

By amory (139 views)

Exon -1

Exon -1

0 1 2 3 4. A. B. Extended exon 0. Extended exon 1. 20 bp exon 0. Exon -1. Exon 4. Exon 1. Exon 2. Exon 3. GHRL. 278 bp. 506 bp. 2.6 kb. 227 bp.

By tamera (105 views)

exon 1

exon 1

A. Step.1-2. B. C. Step.3-1. Step.2. Step.3-2. D. Step.4. E. Step.5. Intensity plot. SI plot. Exon plot. exon 8. exon 2. exon 4. exon 6/6a. exon 10. exon 1. exon 3. exon 5. exon 7. exon 9.

By erich-francis (55 views)

The Jumping Exon

The Jumping Exon

The Jumping Exon. Craig Lowe Rotation Project Working For: Gill Bejerano and David Haussler. Introduction. Jumping exon is an ultra conserved region Blastz finds it in 32 other places in the human genome. Human Occurrences. Distribution. Found in exons, introns, UTRs, and intergenic

By ken (128 views)

Exon 1

Exon 1

Exon 1. Exon 2. Exon 3. a. Intron 2. Intron 1 (104722bp). E E. E E. 3320bp. 613bp. b. -866. 1. 296. 386. -54. -30. -505. -460. -369. -133. -87. -61. 5’-UTR. GC Boxes. FHBE. Putative SNP’s. 1. 386. 1016. 2367. 5723. c. 3’-UTR. 5’-UTR. E1.

By darby (154 views)

Exon 1

Exon 1

21 CAG. Exon 1. Exon 3. Exon 2. Exon 1. Supplemental Figure 1: sequence of trans -spliced product.

By lee-sears (99 views)