'False discovery rate fdr' diaporamas de présentation

High Dimensional Data Analysis

The Sixth Sino-Japan-Korea Bioinformatics Training Course Yu Shyr ( ? ? ), Ph.D. March 30, 2007 Yu.Shyr@vanderbilt.edu. High Dimensional Data Analysis. Shyr, Yu ( ? ? ) , Ph.D. Ingram Distinguished Professor of Cancer Research Director

1.39k views • 99 slides

Computational Immunology

831 views • 56 slides

Inference of cis and trans regulatory variation in the human genome

Inference of cis and trans regulatory variation in the human genome. Manolis Dermitzakis The Wellcome Trust Sanger Institute Wellcome Trust Genome Campus Cambridge, UK md4@sanger.ac.uk. Gene expression. Altered patterns of gene expression ? disease .

542 views • 44 slides

Inference on SPMs: Random Field Theory & Alternatives

Inference on SPMs: Random Field Theory & Alternatives. Thomas Nichols, Ph.D. Department of Statistics & Warwick Manufacturing Group University of Warwick FIL SPM Course 17 May, 2012. image data. parameter estimates. design matrix. kernel. Thresholding & Random Field Theory.

554 views • 42 slides

Inference on SPMs: Random Field Theory & Alternatives

Inference on SPMs: Random Field Theory & Alternatives. Thomas Nichols, Ph.D. Department of Statistics & Warwick Manufacturing Group University of Warwick FIL SPM Course 16 May, 2013. image data. parameter estimates. design matrix. kernel. Thresholding & Random Field Theory.

423 views • 42 slides

Comp. Genomics

Comp. Genomics. Recitation 2 (week 3) 19/3/09. Outline. Finding repeats Branch & Bound for MSA Multiple hypotheses testing. Exercise: Finding repeats. Basic objective: find a pair of subsequences within S with maximum similarity

426 views • 41 slides

Multiple comparison correction

Multiple comparison correction. Klaas Enno Stephan Laboratory for Social and Neural Systems Research Institute for Empirical Research in Economics University of Zurich Functional Imaging Laboratory (FIL) Wellcome Trust Centre for Neuroimaging University College London.

468 views • 31 slides

Hypothesis Testing

376 views • 28 slides

Multiple Testing in the Survival Analysis of Microarray Data

391 views • 27 slides

Needles in Haystacks: Are There Any? How Many Are There? Where Are They?

Needles in Haystacks: Are There Any? How Many Are There? Where Are They?. John Rice University of California, Berkeley. Outline. Classical testing: significance levels, p-values, power Testing many hypotheses: issues and recent developments (false discovery rate)

389 views • 24 slides

Differential Analysis & FDR Correction

Differential Analysis & FDR Correction . Differential Analysis Steps. Step 1: Construction of input data table in EXCEL Step 2: Save EXCEL file into tab delimited txt file Step 3: Upload data - tab delimited txt file Step 4: Choose T or U Test Step 5: Enter your email and submit

345 views • 22 slides

Significance testing

Statistics Applied to Bioinformatics. Significance testing. Compare target score with rest of scores. Score 330 lies here, way outside the heap of random scores. freq. The scores of unrelated (random) database hits. score. Example: scanning a database with a sequence

332 views • 19 slides

Significance analysis of microarrays (SAM)

Significance analysis of microarrays (SAM). SAM can be used to pick out significant genes based on differential expression between sets of samples. Currently implemented for the following designs: - two-class unpaired two-class paired multi-class censored survival one-class. SAM.

245 views • 9 slides

Martin Styner, UNC (algorithms) Jim Miller, GE Research (software support)

2006 Summer PrWeek. False Discovery Rate for Shape Analysis: Develop algorithm and ITK software module for False Discovery Rate (FDR) analysis. Plan/Expected Challenges/Publication. Team. Algorithms: False Discovery Rate(FDR) for local shape analysis. Martin Styner, UNC (algorithms)

136 views • 1 slides