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Fasta hashing - PowerPoint PPT Presentation

Applied Bioinformatics

Applied Bioinformatics. Week 4. Similarity Searching. Heuristic Algorithms FASTA BLAST. FASTA Algorithm. Algorithm? Pearson and Lipman 1988. FASTA - Algorithm -. High level algorithm Let q be a query max ? 0 For each sequence, s in DB compare q with s and compute a score, y

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Fasta hashing - PowerPoint PPT Presentation

Applied Bioinformatics