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File awk - PowerPoint PPT Presentation

CSE4251 The Unix Programming Environment

CSE4251 The Unix Programming Environment. Lecture 10. awk. Recap. Regular expressions (lec-5) symbols & rules to describe text patterns/filters Unix commands/utilities that support regular expressions grep ( fgrep , egrep ) - search a file for a string or regular expression

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Linux command line basics III: piping commands for text processing

Linux command line basics III: piping commands for text processing. Yanbin Yin Fall 2014. http:// korflab.ucdavis.edu / Unix_and_Perl /unix_and_perl_v3.1.1.pdf. The beauty of Unix for bioinformatics sort , cut, uniq , join, paste, sed , grep , awk , wc , diff, comm , cat.

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315 views • 19 slides

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File awk - PowerPoint PPT Presentation

CSE4251 The Unix Programming Environment

Linux command line basics III: piping commands for text processing