'Genome annotation' diaporamas de présentation

Making best use of TAIR tools and datasets

Making best use of TAIR tools and datasets. Philippe Lamesch Donghui Li The Arabidopsis Information Resource www.arabidopsis.org contact us: curator@arabidopsis.org. TAIR: The Arabidopsis Information Resource. collect, curate and distribute information on Arabidopsis

1.23k views • 106 slides

MAKER: An easy to use genome annotation pipeline

MAKER: An easy to use genome annotation pipeline. Carson Holt Yandell Lab Department of Human Genetics University of Utah. Introduction to Genome Annotation. What annotations are Importance of genome annotations Effect of next generation sequencing technologies on the annotation process.

948 views • 58 slides

iPRG 2013: Using RNA- Seq data for Peptide and Protein Identification

iPRG 2013: Using RNA- Seq data for Peptide and Protein Identification. ABRF 2013, Palm Springs, CA 3/02-05/2013. iPRG2013 Study: DESIGN. Study Goals. Primary : Evaluate how many extra peptide sequence identifications can be determined using databases derived from RNA- Seq data

636 views • 47 slides

Bacterial genome annotation in the AGC group

608 views • 42 slides

DNA sequencing.

DNA sequencing. Dideoxy analogs of normal nucleotide triphosphates (ddNTP) cause premature termination of a growing chain of nucleotides. ACAGTCGATTG ACAddG ACAGTCddG ACAGTCGATTddG

640 views • 31 slides

AstroDAS : Sharing Assertions across Astronomy Catalogues through Distributed Annotation

409 views • 30 slides

Bioinformatics resources for IITA Crops

Bioinformatics resources for IITA Crops. GO Workshop 3-6 August 2010. IITA Crops. Genome annotation General plant genome resources IITA crops What is needed?. Genomic Annotation.

370 views • 29 slides

Help Desk Update

Help Desk Update. Dave Clements GMOD Help Desk US National Evolutionary Synthesis Center (NESCent) clements@nescent.org. January 2010 GMOD Meeting 14-15 January 2010. Agenda. Project Statistics Training and Outreach Genome Visualization Grant Proposal New Components

393 views • 24 slides

Genome annotation

Genome annotation The complete genome sequence by itself is just raw data and does not mean anything unless annotated Annotation means adding specific structural or functional information about a specific region of the genome or for the whole genome

1.18k views • 22 slides

PRINTS Overview

1.42k views • 17 slides

Experimental and computational assessment of conditionally essential genes in E. coli

Experimental and computational assessment of conditionally essential genes in E. coli. Chao WANG, Oct 11 2006.

267 views • 16 slides

Community Curation in FlyBase 10 ways that researchers can help improve FlyBase data

252 views • 14 slides

A Study of GeneWise with the Drosophila Adh Region

A Study of GeneWise with the Drosophila Adh Region. Asta Gindulyte CMSC 838 Presentation Authors: Yi Mo, Moira Regelson, and Mike Sievers Paracel Inc., Pasadena, CA. Motivation. Genome annotation Extraction of biologically relevant knowledge from raw genomic sequence data

227 views • 14 slides

Group 5 Problem #3 - Annotation of Chlamydia trachomatis Genome

Group 5 Problem #3 - Annotation of Chlamydia trachomatis Genome. Members: Soh Shu E, Peh Bee Keow, Chua Li Ming, Constance, Raquel De Melo Jorge De Magalhaes, Cheong Yuh Meng, Clement, Lee Yie Hou, Zakaria Ali Moh. Almsherqi, Chiang Cern Cher, Samuel.

301 views • 12 slides

Manolis Kellis: Research synopsis

Manolis Kellis: Research synopsis. Why biology in a computer science group? Big biological questions: Interpreting the human genome. Revealing the logic of gene regulation. Principles of evolutionary change. Underlying computational techniques:

398 views • 12 slides

Bioinformatics and Genome Data Analysis

Bioinformatics and Genome Data Analysis. Fredj Tekaia Institut Pasteur tekaia@pasteur.fr. Bioinformatics and Genome Data Analysis. This advanced course aims at bringing multidisciplinary scientists around : a) What we learned from completely sequenced genomes. (Conferences: 1/2 time)

333 views • 10 slides

GO Term Integration and Curation in Pathway Tools and EcoCyc

GO Term Integration and Curation in Pathway Tools and EcoCyc. Ingrid M. Keseler Bioinformatics Research Group SRI International keseler@ai.sri.com. History of Classification and GO terms in EcoCyc. The MultiFun classification scheme was/is used for

422 views • 10 slides

Pre-SIG meeting " Genome Annotation" A BioSapiens initiative Goal of the workshop were

Pre-SIG meeting " Genome Annotation" A BioSapiens initiative Goal of the workshop were - to create an open forum to discuss current problems on function annotation, to foster the analysis of key scientific issues in function prediction,

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Breakout Session 1: Preparing Students Bill Morgan, facilitator

Breakout Session 1: Preparing Students Bill Morgan, facilitator. Preparing undergraduates to succeed in college and beyond in a bioinformatics-rich curriculum Discussion of existing resources, opportunities, and challenges Relevant issues identified in the pre-conference survey include:

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Introduction

The Meiothermus ruber (Thermales, Thermaceae) Genome Annotation Project - an authentic research experience for undergraduates in microbial genome analysis.

132 views • 1 slides