'Genome shotgun' diaporamas de présentation

Genome Biology and Biotechnology

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VL Algorithmische BioInformatik (19710) WS2015/2016 Woche 7 - Mittwoch

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DNA Sequencing

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Conditional Random Fields

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Genome Assembly and Annotation

Genome Assembly and Annotation. Erik Arner Omics Science Center, RIKEN Yokohama, Japan arner@gsc.riken.jp. NCBI Map Viewer. NCBI Map Viewer. Entrez Gene. Entrez Gene. Entrez Gene. Entrez Gene. Aims of lecture. How was the human genome put together Limitations

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Genome Sequencing and Assembly High throughput Sequencing

Genome Sequencing and Assembly High throughput Sequencing. Xiaole Shirley Liu Jun Liu STAT115, STAT215. Outline. Genome sequencing strategy Clone-by-clone sequencing Whole-genome shotgun sequencing Hybrid method Next generation sequencing technologies. Competing Sequencing Strategies.

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Mimulus guttatus : a resource for comparative genomics in the asterids

Mimulus guttatus : a resource for comparative genomics in the asterids. UNC Chapel Hill: Todd Vision et al. (Toby Clarke, Amy Bouck, Eric Ganko*, Andrew Morgan, Stefanie Hartmann, Jason Phillips) Duke University: John Willis et al University of Washington: Toby Bradshaw et al

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Mimulus guttatus : a resource for comparative genomics in the asterids

Mimulus guttatus : a resource for comparative genomics in the asterids. UNC Chapel Hill: Todd Vision et al. (Toby Clarke, Amy Bouck, Eric Ganko*, Andrew Morgan, Stefanie Hartmann, Jason Phillips) Duke University: John Willis et al University of Washington: Toby Bradshaw et al

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Mimulus guttatus : a resource for comparative genomics in the asterids

Mimulus guttatus : a resource for comparative genomics in the asterids. UNC Chapel Hill: Todd Vision et al. (Toby Clarke, Amy Bouck, Eric Ganko*, Andrew Morgan, Stefanie Hartmann, Jason Phillips) Duke University: John Willis et al University of Washington: Toby Bradshaw et al

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Phymatotrichopsis omnivora genomic sequencing

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The progress of Glossina genomics at RIKEN GSC

The progress of Glossina genomics at RIKEN GSC. Todd Taylor taylor@gsc.riken.jp RIKEN Genomic Sciences Center, Yokohama, Japan (on behalf of Masahira Hattori) December 15, 2006, IGGI, Sanger, UK. Background. Sequencing and analysis of human chromosomes 11, 18 and 21

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Methods in genome sequencing and SNP finding

Methods in genome sequencing and SNP finding. Gabor Marth BI 820 presented by Tony Faber. Sequences used in SNP analysis and genomic sequencing . Expressed Sequence Tags (ESTs) Sequence-tagged site (STS) sequences Reduced Representation Libraries (RRL) Whole-genome shotgun libraries

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Introduction

Whole Genome Shotgun Assembly Mike Ge, Enping Hong, Ariana Minot, Owen Astrachan Department of Computer Science, Duke University. Computer Science and WGSA Computer science is essential to the workings of WGSA in several ways:

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