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Resolving ambiguity in DNA sequences

Resolving ambiguity in DNA sequences

Resolving ambiguity in DNA sequences. Judith Keijsper Steven Kelk Leen Stougie Leo van Iersel. DNA. SNP’s: sites where variation is observed. SNP’s: sites that are interesting. SNP’s: binary strings. Two binary strings: haplotypes. +. One ternary string: genotype.

By libitha
(408 views)

The “Russian Farmer” Problem Continued

The “Russian Farmer” Problem Continued

The “Russian Farmer” Problem Continued. (F,W,G,C) (l, l, l, l). (r, l, r, l). (l, l, r, l). (r, r, r, l) (r, l, r, r). (l, r, l, l) (l, l, l, r). (r, r, l, r) (r, r, l, r). (l, r, l, r) (l, r, l, r). (r, r, r, r).

By Melvin
(267 views)

The “Russian Farmer” Problem Continued

The “Russian Farmer” Problem Continued

The “Russian Farmer” Problem Continued. (F,W,G,C) (l, l, l, l). (r, l, r, l). (l, l, r, l). (r, r, r, l) (r, l, r, r). (l, r, l, l) (l, l, l, r). (r, r, l, r) (r, r, l, r). (l, r, l, r) (l, r, l, r). (r, r, r, r).

By sandra_john
(303 views)

Adaptive Noise Cancellation: A Panacea

Adaptive Noise Cancellation: A Panacea

Adaptive Noise Cancellation: A Panacea. Evans, R. Adhikari. The Concept. 5000 Channels 1 GW Channel Signal = DARM - noise. Wiener Filter. Norbert Wiener, MIT. Block Toeplitz. Cross Correlation Matrix. Input Signal (PEM) Covariance Matrix. Wiener Filter Sim. H1. L1.

By Gabriel
(428 views)

Multiple Shooting:

Multiple Shooting:

Multiple Shooting:. No One Injured !. Newton’s Method in Review (1-D). Approximates x n given f and initial guess x 0. Newton’s Method Expanded (n-D). To Solve the System F(x)=0, F:R n  R n We use X k+1 =x k -(F’(x k )) -1 F(x k ) Where F’(x k ) := J(x k )

By Ava
(363 views)

Finding Similar Pairs

Finding Similar Pairs

Finding Similar Pairs. Divide-Compute-Merge Locality-Sensitive Hashing Applications. Finding Similar Pairs. Suppose we have in main memory data representing a large number of objects. May be the objects themselves (e.g., summaries of faces). May be signatures as in minhashing.

By cornell
(183 views)

PIPELINE COMPUTATION

PIPELINE COMPUTATION

PIPELINE COMPUTATION. Lesson 2. p 2. p 1. 2. 2. 1. 1. h 2. h 1.  v.  o.  i. L , D. 0. 0. Scheme of pipeline for illustrative problem 2.1. Illustrative problem.

By don
(277 views)

Evolving Local Search Heuristics for SAT Using Genetic Programming

Evolving Local Search Heuristics for SAT Using Genetic Programming

Evolving Local Search Heuristics for SAT Using Genetic Programming. Alex Fukunaga Computer Science Department University of California, Los Angeles. Outline. Satisfiability testing Local search for SAT CLASS: A GP system for discovering SAT local search heuristics

By omer
(130 views)

Portier and Richet first coined the term anaphylaxis.

Portier and Richet first coined the term anaphylaxis.

Portier and Richet first coined the term anaphylaxis. In 1902 when a second vaccinating dose of sea anemone toxin caused a dog's death. The response was the opposite of prophylaxis and thus was referred to as anaphylaxis, meaning without protection. . Phylaxis = protection.

By misae
(422 views)

CS 4700: Foundations of Artificial Intelligence

CS 4700: Foundations of Artificial Intelligence

CS 4700: Foundations of Artificial Intelligence. Carla P. Gomes gomes@cs.cornell.edu Module: Neural Networks Multi-Layer-Perceptron (Reading: Chapter 20.5). Perceptron: Linear Separable Functions. x 2. Not linearly separable. +. -. XOR. x 1. -. +. Minsky & Papert (1969)

By Jims
(180 views)

Energy Conservation

Energy Conservation

Energy Conservation. And Non-Conservative Forces. Conservation of Mechanical Energy. Definition of mechanical energy:. (8-6). Using this definition and considering only conservative forces, we find. Or equivalently. Conservation of Mechanical Energy.

By ember
(113 views)

Uncertainty Principles, Extractors, and Explicit Embeddings of L 2 into L 1

Uncertainty Principles, Extractors, and Explicit Embeddings of L 2 into L 1

Uncertainty Principles, Extractors, and Explicit Embeddings of L 2 into L 1. Piotr Indyk MIT. Uncertainty principles (UP). Consider a vector x R n and a Fourier matrix F UP: either x or Fx must have “many” non-zero entries (for x ≠0 ) History: Physics: Heisenberg principle

By sonnagh
(149 views)

Cascading Style Sheets (CSS) – Part I

Cascading Style Sheets (CSS) – Part I

Cascading Style Sheets (CSS) – Part I. Svetlin Nakov. Telerik Corporation. www.telerik.com. Table of Contents (Part I). What is CSS? Styling with Cascading Stylesheets (CSS) Selectors and style definitions Linking HTML and CSS Fonts, Backgrounds, Borders. CSS : A New Philosophy.

By bryga
(120 views)

Quantum Computing Part 1: Quantum Mechanics Overview

Quantum Computing Part 1: Quantum Mechanics Overview

Quantum Computing Part 1: Quantum Mechanics Overview. Technological limits. Gordon Moore’s law :

By azuka
(128 views)

Chapter 8 	Hashing

Chapter 8 Hashing

Chapter 8 Hashing . Part II. Introduction. Consider we may perform insertion, searching and deletion on a dictionary (symbol table). Is it possible to perform these operations in O(1) ? . Introduction.

By genesis
(123 views)

Traverse Calculations

Traverse Calculations

Determine Angular Misclosure Balance Angular Misclosure Determine Directions of Sides Latitudes and Departures Determine Linear Misclosure Adjust Linear Misclosure Determine Area Enclosed. Traverse Calculations. Angular Misclosure. Total = (n-2)(180) n = 5, Total = 540 °.

By lynch
(1294 views)

Physics

Physics

Physics. Session. Fluid Mechanics - 1 . Session Objectives. Session Objective. Pressure depth relationship Pressure depth graph plot Pascal's Law Archimedes's Principle Floating Objects Submerged Objects Pressure difference and buoyant force in accelerating fluids.

By lexiss
(160 views)

Expanders, Universal Graphs and Disjoint Paths

Expanders, Universal Graphs and Disjoint Paths

Expanders, Universal Graphs and Disjoint Paths. Noga Alon Joint work with Michael Capalbo. TexPoint fonts used in EMF. Read the TexPoint manual before you delete this box.: A A A A A A A A. Eigenvalues and Expanders. Expanders are constant-degree graphs in which

By twyla
(131 views)

Notes on the analysis of multiplication algorithms.. Dr. M. Sakalli, Marmara University

Notes on the analysis of multiplication algorithms.. Dr. M. Sakalli, Marmara University

Notes on the analysis of multiplication algorithms.. Dr. M. Sakalli, Marmara University. Integer Multiplication MIT notes and wikipedia. Example.. Classic High school math.. Let g = A|B and h = C|D where A,B,C and D are n/2 bit integers

By fabiano
(168 views)

Probability 1

Probability 1

Probability 1. The Probability Scale Probability as Fractions Listing Outcomes Sample Space. The Probability Line. ANSWERS 2. 0.1 0.5 0.2 0.2 0 1 0.4 0.6. Home. Probability as Fractions. ANSWERS 3/10 ½ 1/5 0 4/5 7/10 ½ ¼ 1/20 ¾ ½ ¼ ¼ ½ 1/13 1/13 4/13 4/13

By fauna
(123 views)

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