'Haplotype blocks' diaporamas de présentation

The Questions

The Questions. Why study haplotypes? How can haplotypes be inferred? What are haplotype blocks? How can haplotype information be used to test associations with disease phenotypes? How shall we select a subset of informative SNPs for large-scale typing?

634 views • 63 slides

A Data Compression Problem

622 views • 54 slides

Introduction to SNP and Haplotype Analysis

Introduction to SNP and Haplotype Analysis. Yao-Ting Huang. Kun-Mao Chao. Algorithms and Computational Biology Lab, Department of Computer Science & Information Engineering, National Taiwan University, Taiwan. Genetic Variations.

547 views • 54 slides

Introduction to SNP and Haplotype Analysis

Introduction to SNP and Haplotype Analysis. Yao-Ting Huang. Kun-Mao Chao. Algorithms and Computational Biology Lab, Department of Computer Science & Information Engineering, National Taiwan University, Taiwan. Genetic Variations.

672 views • 52 slides

SNPs, Haplotypes, Disease Associations

SNPs, Haplotypes, Disease Associations. Algorithmic Foundations of Computational Biology II Course 1. Prof. Sorin Istrail. SNPs and the Human Genome: The Minimal Informative Subset. Overview. Introduction: SNPs, Haplotypes A Data Compression Problem:

722 views • 44 slides

MEDG 505 Pharmacogenomics March 17, 2005 A. Brooks-Wilson

543 views • 44 slides

Advanced Algorithms and Models for Computational Biology -- a machine learning approach

Advanced Algorithms and Models for Computational Biology -- a machine learning approach. Population Genetics: More on halpltypes --- coalescence, multi-population phasing, blocks, etc. Eric Xing Lecture 19, March 27, 2006. Clustering. How to label them ? inference How many clusters ???

568 views • 42 slides

Pattern Identification in a Haplotype Block

Pattern Identification in a Haplotype Block. Kun-Mao Chao ( ??? ) Graduate Institute of Biomedical Electronics and Bioinformatics National Taiwan University, Taiwan http://www.csie.ntu.edu.tw/~kmchao. Genetic Variations.

545 views • 35 slides

Pattern Identification in a Haplotype Block

Pattern Identification in a Haplotype Block. Kun-Mao Chao ( ??? ) Graduate Institute of Biomedical Electronics and Bioinformatics National Taiwan University, Taiwan http://www.csie.ntu.edu.tw/~kmchao. Genetic Variations.

352 views • 35 slides

Trait Mapping

Trait Mapping. Recombination Mapping SNP mapping. BIO520 Bioinformatics Jim Lund. cause inherited diseases. Why do we care about variations?. underlie phenotypic differences. allow tracking human history (ancient and modern). Traits. Mendelian single locus, few alleles

567 views • 32 slides

Anitha Kannan and John Winn

Bayesian association of haplotypes and non-genetic factors to regulatory and phenotypic variation in human populations. Anitha Kannan and John Winn. Jim Huang *.

290 views • 22 slides

Regions of the Canine Genome Associated with Osteosarcoma Identified by a Whole Genome

Regions of the Canine Genome Associated with Osteosarcoma Identified by a Whole Genome Case-Control Association Study. Kenine E Comstock , Elinor Karlsson, Claire Wade, Evan T Keller, Eric Lander, Laurence Baker, Kerstin Lindblad-Toh

396 views • 22 slides

Anitha Kannan and John Winn

Bayesian association of haplotypes and non-genetic factors to regulatory and phenotypic variation in human populations. Anitha Kannan and John Winn. Jim Huang *.

328 views • 22 slides

Genomics

526 views • 22 slides

Human SNP haplotypes

Human SNP haplotypes. Statistics 246, Spring 2002 Week 15, Lecture 1. Human single nucleotide polymorphisms.

367 views • 20 slides

Dr. Russell Thomson

184 views • 18 slides

Dr. Russell Thomson

189 views • 18 slides

Association Studies, Haplotype Blocks and Tagging SNPs

Association Studies, Haplotype Blocks and Tagging SNPs. Prof. Sorin Istrail CSCI2950-L Tues. & Thur. 2:30-3:50p.m. CIT room 241. Control Non-responder. Disease Responder. Allele 0. Allele 1. Marker A: Allele 0 = Allele 1 =. Marker A is associated with Phenotype. Association studies.

171 views • 17 slides

The International Consortium. The International HapMap Project. Nature. 426, 789-796 (2003)

The International Consortium. The International HapMap Project. Nature. 426, 789-796 (2003). The International HapMap Project. Launched October 29, 2002 Major initiative to map human genetic variation based on haplotype patterns.

309 views • 11 slides