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Combinatorial Pattern Matching

Combinatorial Pattern Matching

Combinatorial Pattern Matching. Outline. Week 08: Quiz 2 Hash Tables Repeat Finding Exact Pattern Matching Keyword Trees Suffix Trees Week 09: Heuristic Similarity Search Algorithms Approximate String Matching Filtration Comparing a Sequence Against a Database Algorithm behind BLAST

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1.21k views • 102 slides
Combinatorial Pattern Matching

Combinatorial Pattern Matching

Combinatorial Pattern Matching. Outline. Hash Tables Repeat Finding Exact Pattern Matching Keyword Trees Suffix Trees Heuristic Similarity Search Algorithms Approximate String Matching Filtration Comparing a Sequence Against a Database Algorithm behind BLAST Statistics behind BLAST

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1.31k views • 102 slides
Combinatorial Pattern Matching

Combinatorial Pattern Matching

Combinatorial Pattern Matching. Outline. Hash Tables Repeat Finding Exact Pattern Matching Keyword Trees Suffix Trees Heuristic Similarity Search Algorithms Approximate String Matching Filtration Comparing a Sequence Against a Database Algorithm behind BLAST Statistics behind BLAST

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1.23k views • 100 slides
CSE 5290: Algorithms for Bioinformatics Fall 2009

CSE 5290: Algorithms for Bioinformatics Fall 2009

CSE 5290: Algorithms for Bioinformatics Fall 2009. Suprakash D at ta datta@cs.yorku.ca Office: CSEB 3043 Phone: 416-736-2100 ext 77875 Course page: http://www.cs.yorku.ca/course/5290. Next. Pattern matching Some of the following slides are based on slides by the authors of our text.

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763 views • 75 slides
Lecture 16: Combinatorial Pattern Matching

Lecture 16: Combinatorial Pattern Matching

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697 views • 53 slides

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