'Maximal repeats' diaporamas de présentation

Combinatorial Pattern Matching

Combinatorial Pattern Matching. Outline. Week 08: Quiz 2 Hash Tables Repeat Finding Exact Pattern Matching Keyword Trees Suffix Trees Week 09: Heuristic Similarity Search Algorithms Approximate String Matching Filtration Comparing a Sequence Against a Database Algorithm behind BLAST

1.21k views • 102 slides

Combinatorial Pattern Matching

Combinatorial Pattern Matching. Outline. Hash Tables Repeat Finding Exact Pattern Matching Keyword Trees Suffix Trees Heuristic Similarity Search Algorithms Approximate String Matching Filtration Comparing a Sequence Against a Database Algorithm behind BLAST Statistics behind BLAST

1.31k views • 102 slides

Combinatorial Pattern Matching

Combinatorial Pattern Matching. Outline. Hash Tables Repeat Finding Exact Pattern Matching Keyword Trees Suffix Trees Heuristic Similarity Search Algorithms Approximate String Matching Filtration Comparing a Sequence Against a Database Algorithm behind BLAST Statistics behind BLAST

1.23k views • 100 slides

Introduction on biological sequence indexing, searching and text mining

Introduction on biological sequence indexing, searching and text mining. ??????????????? ???. Outlines. Introduction on sequence searching Patten Searching -Suffix tree BLAST Introduction on text mining -Case study. Bioinformatics topics.

975 views • 77 slides

Introduction on biological sequence indexing, searching and text mining

Introduction on biological sequence indexing, searching and text mining. ??????????????? ???. Outlines. Introduction on sequence searching Patten Searching -Suffix tree BLAST Introduction on text mining -Case study. Bioinformatics topics.

776 views • 77 slides

CSE 5290: Algorithms for Bioinformatics Fall 2009

CSE 5290: Algorithms for Bioinformatics Fall 2009. Suprakash D at ta datta@cs.yorku.ca Office: CSEB 3043 Phone: 416-736-2100 ext 77875 Course page: http://www.cs.yorku.ca/course/5290. Next. Pattern matching Some of the following slides are based on slides by the authors of our text.

763 views • 75 slides

Lecture 16: Combinatorial Pattern Matching

697 views • 53 slides

IEPAD: Information Extraction based on Pattern Discovery

IEPAD: Information Extraction based on Pattern Discovery. Chia-Hui Chang National Central University, Taiwan http://www.csie.ncu.edu.tw/~chia. Outline. Introduction Problem definition Related Work System architecture Extraction rule generation Experiments Summary and future work.

456 views • 37 slides

Combinatorial Pattern Matching

Combinatorial Pattern Matching. CS 466 Saurabh Sinha. Genomic Repeats. Example of repeats: AT GGTC TA GGTC CTAGT GGTC Motivation to find them: Evolutionary annotation Diseases associated with repeats. Genomic Repeats. The problem is often more difficult: AT GGTC TA GG A C CTAGT G T TC

455 views • 31 slides

IEPAD: Information Extraction Based on Pattern Discovery

389 views • 25 slides