'Novo assembly' diaporamas de présentation

Big Data Challenges in Biology and the Sheffield Bioinformatics Hub Dr. Roy Chaudhuri Department Of Molecular Biology an

Big Data Challenges in Biology and the Sheffield Bioinformatics Hub Dr. Roy Chaudhuri Department Of Molecular Biology and Biotechnology. Marta Milo Biomedical Science. Roy Chaudhuri Molecular Biology and Biotechnology. Eran Elhaik Animal and Plant Sciences. James Bradford Oncology.

643 views • 36 slides

Greg Phillips Veterinary Microbiology gregory@iastate

Greg Phillips Veterinary Microbiology gregory@iastate.edu. Next Generation DNA Sequencing. Review of DNA sequencing technology 3 Next Gen platforms-technology (and advertising) New applications of Next Gen technology Next Next Gen technology $1,000 genome. The First Generation-

548 views • 34 slides

Exome / genome re-sequencing

Raw Illumina reads FASTQ. Exome / genome re-sequencing. Quality control (QC). Filtering. Mapping. Reference annotation. Call variants. Annotate & filter variants. Raw Illumina reads FASTQ. Quality control (QC). Filtering. Mapping. Call variants. Annotate & filter variants.

431 views • 25 slides

De-novo Assembly

De-novo Assembly. Day 4. The Challenge. Given many (millions or billions) of reads, produce a linear (or perhaps circular) genome Issues : Coverage Errors in reads Reads vary from very short (35bp) to quite long (800bp), and are double-stranded Non-uniqueness of solution

569 views • 19 slides

ISB

218 views • 12 slides

plasmid dna sequencing

CD Genomics provides complete plasmid DNA sequencing service, and our improved bioinformatics pipelines are available to perform de novo assembly with no reference required.

81 views • 2 slides