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CS 5263 Bioinformatics

CS 5263 Bioinformatics

CS 5263 Bioinformatics. Lecture 4: Local Sequence Alignment, More Efficient Sequence Alignment Algorithms. Roadmap. Review of last lecture Local sequence alignment More efficient sequence alignment algorithms. Given a scoring scheme, Match: m Mismatch: -s Gap: -d

By fathia
(131 views)

Lecture 2: Gene and protein sequence alignment methods .

Lecture 2: Gene and protein sequence alignment methods .

Lecture 2: Gene and protein sequence alignment methods. CGGATCAT—GGA CTTAACATTGAA GAGAACATAGTA. Gene and Protein Sequence Alignment as a Mathematical Problem:. Example: Sequence a:  ATTCTTGC Sequence b: ATCCTATTCTAGC

By juana
(107 views)

Protein Evolution: SARS coronavirus as an example

Protein Evolution: SARS coronavirus as an example

CZ5225 Methods in Computational Biology Lecture 2-3: Protein Families and Family Prediction Methods Prof. Chen Yu Zong Tel: 6874-6877 Email: csccyz@nus.edu.sg http://xin.cz3.nus.edu.sg Room 07-24, level 7, SOC1, NUS August 2004. Protein Evolution: SARS coronavirus as an example.

By samira
(152 views)

Sequence Alignment

Sequence Alignment

Sequence Alignment. Kun-Mao Chao ( 趙坤茂 ) Department of Computer Science and Information Engineering National Taiwan University, Taiwan E-mail: kmchao@csie.ntu.edu.tw WWW: http://www.csie.ntu.edu.tw/~kmchao. Bioinformatics. Bioinformatics and Computational Biology-Related Journals:.

By inga
(76 views)

Fasta, Blast, Probabilities

Fasta, Blast, Probabilities

Fasta, Blast, Probabilities. Reminder. Last classes we discussed dynamic programming algorithms for global alignment local alignment Multiple alignment All of these assumed a scoring rule: that determines the quality of perfect matches, substitutions, insertions, and deletions.

By orea
(143 views)

Sequence Alignment

Sequence Alignment

Sequence Alignment. Kun-Mao Chao ( 趙坤茂 ) Department of Computer Science and Information Engineering National Taiwan University, Taiwan WWW: http://www.csie.ntu.edu.tw/~kmchao. What?. THETR UTHIS MOREI MPORT ANTTH ANTHE FACTS. The truth is more important than the facts. Dot Matrix.

By apria
(97 views)

Sequence Alignment

Sequence Alignment

Sequence Alignment. Kun-Mao Chao ( 趙坤茂 ) Department of Computer Science and Information Engineering National Taiwan University, Taiwan WWW: http://www.csie.ntu.edu.tw/~kmchao. GenBank 200.0. orz’s sequence evolution. the origin? their evolutionary relationships?

By amena-ayala
(83 views)

Sequence Alignment

Sequence Alignment

Sequence Alignment. Kun-Mao Chao ( 趙坤茂 ) Department of Computer Science and Information Engineering National Taiwan University, Taiwan E-mail: kmchao@csie.ntu.edu.tw WWW: http://www.csie.ntu.edu.tw/~kmchao. Bioinformatics. Bioinformatics and Computational Biology-Related Journals:.

By ryanwilson
(0 views)

Sequence Alignment

Sequence Alignment

Sequence Alignment. Kun-Mao Chao ( 趙坤茂 ) Department of Computer Science and Information Engineering National Taiwan University, Taiwan WWW: http://www.csie.ntu.edu.tw/~kmchao. What?. THETR UTHIS MOREI MPORT ANTTH ANTHE FACTS. The truth is more important than the facts. Dot Matrix.

By janicegarcia
(2 views)

SMA5422: Special Topics in Biotechnology

SMA5422: Special Topics in Biotechnology

SMA5422: Special Topics in Biotechnology. Lecture 7: Gene and protein sequence alignment methods. CGGATCAT—GGA CTTAACATTGAA GAGAACATAGTA. Gene and Protein Sequence Alignment as a Mathematical Problem:. Example: Sequence a:  ATTCTTGC Sequence b: ATCCTATTCTAGC

By donslater
(0 views)


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