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Multiple Sequence Alignment (II)

C. E. N. T. E. R. F. O. R. I. N. T. E. G. R. A. T. I. V. E. B. I. O. I. N. F. O. R. M. A. T. I. C. S. V. U. Introduction to bioinformatics 2007 Lecture 10. Multiple Sequence Alignment (II). Progressive multiple alignment. 1. Score 1-2. 2. 1. Score 1-3. 3.

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Introduction to bioinformatics lecture 9

Introduction to bioinformatics lecture 9. Multiple sequence alignment (II). Scoring a profile position. Profile 1. Profile 2. A C D . . Y. A C D . . Y. At each position (column) we have different residue frequencies for each amino acid (rows) SO:

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Introduction to bioinformatics Lecture 8 Multiple sequence alignment (2)

Introduction to bioinformatics Lecture 8 Multiple sequence alignment (2). Flavodoxin-cheY: Pre-processing (prepro 1500). Progressive multiple alignment general principles. 1. Score 1-2. 2. 1. Score 1-3. 3. 4. Score 4-5. 5. Scores. Similarity matrix. 5×5. Scores to distances.

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Multiple Sequence Alignment (II)

Introduction to bioinformatics lecture 9

Introduction to bioinformatics Lecture 8 Multiple sequence alignment (2)