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SFC Brain Imaging Research Centre

SFC Brain Imaging Research Centre. Data Management in Brain Imaging. TREVOR CARPENTER trevor.carpenter@ed.ac.uk. Overview. SBIRC + SINAPSE Regulatory Framework Project Data Current Practice Current Developments. SBIRC. SFC Brain Imaging Research Centre Situated at WGH

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SFC Brain Imaging Research Centre

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  1. SFC Brain Imaging Research Centre Data Management in Brain Imaging TREVOR CARPENTER trevor.carpenter@ed.ac.uk

  2. Overview • SBIRC + SINAPSE • Regulatory Framework • Project Data • Current Practice • Current Developments

  3. SBIRC • SFC Brain Imaging Research Centre • Situated at WGH • ~12,000 subjects studied in 11 yrs • Provides Imaging and technical support for studies in: • Psychiatry • Psychology • Stroke • Oncology • WE ALSO DO OUR OWN RESEARCH!

  4. SINAPSE • SINAPSE • Consortium of six Scottish universities • Collaborative research in Brain Imaging • Support and connections to CRNs • Data distribution, storage and cataloguing • Second phase to provide processing and applications

  5. SBIRC + SINAPSE • Who do we acquire imaging from: • NHS Patients • – Service provision to NHS • NHS Patients in Research studies • Volunteers

  6. Regulatory Framework • Data Protection Act: • Personal data should not be held longer than necessary • Cannot be reused • R&D Ethics Committee: • Time frame should be placed upon retention period • Cannot be reused • MRHA: • Data should be retained

  7. BOP Ethics, R&D Insurance Internal Forms Raw Data ‘Image Data’ Subject Data Paradigm Proc’ Data ‘Image Data’ Study Results Data Bases Publications Reports Journal Papers Applications Source Code Processing scripts ACTIVITY! ACTIVITY Project Data COMMUNITY RESOURCE ARCHIVE

  8. Project Data • Raw Data: • Usually in standard format (DICOM, e-Prime) • Processed Data: • Various formats (often excel, word) • Varies from project to project • Software: • Often closed source • No version control

  9. Current Practice • Raw Data: • Archived on CD / Tape - NAS • Processed Data: • Responsibility of PI • Software: • Version control available • poor uptake • Not centrally available • Not open source

  10. Future Developments • SOPs to cover archiving of project data – • Including: • Creation of data dictionaries • Documenting analysis procedures • Specifying preferred data formats • BUT…. • not popular – does not publish papers (RAE)! • HOWEVER…. • Some data is very valuable and should be captured • (LBC 1936, 1921 Cohort)

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