'Potts model' diaporamas de présentation

Exploring Fitness and Free Energy Landscapes of Proteins

Exploring Fitness and Free Energy Landscapes of Proteins Part 1: Statistical Models of Sequence Co-Variation. Fitness and drug resistance in HIV proteins Maximum entropy (Potts) models of residue co-variation Epistasis and entrenchment of mutations under drug selection pressure

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Ferromagnetic Clustering

Ferromagnetic Clustering. Data clustering using a model granular magnet. Introduction.

514 views • 44 slides

CompuCell3D: A Morphogenesis simulation package

CompuCell3D: A Morphogenesis simulation package. Nan Chen and Mark Alber 2/20/2006. Topics. Introduction to CompuCell3D Cellular Potts Model Framework of CompuCell3D Usage of CompuCell3D Future Plans. Introduction to CompuCell3D. CompuCell3D overview.

530 views • 35 slides

Slow and Fast Mixing of Tempering and Swapping for the Potts Model

Slow and Fast Mixing of Tempering and Swapping for the Potts Model. Nayantara Bhatnagar, UC Berkeley Dana Randall, Georgia Tech. lim Pr[X t = Y | X 0 ] = ? (Y). t ? ?. Markov Chains. K = ( ? , P ). P(X,Y).

495 views • 34 slides

Rule-based spatially resolved modeling of cellular signaling processes

444 views • 31 slides

CompuCell Software

357 views • 27 slides

word

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Parameter Learning in Markov Nets

Parameter Learning in Markov Nets. Dhruv Batra , 10-708 Recitation 11/13/ 2008. Contents. MRFs Parameter learning in MRFs IPF Gradient Descent HW5 implementation. Semantics. Priors on edges Ising Prior / Potts Model Metric MRFs. Metric MRFs. Energies in pairwise MRFs. HW4.

241 views • 15 slides

The Potts and Ising Models of Statistical Mechanics

The Potts and Ising Models of Statistical Mechanics . The Potts Model.

562 views • 14 slides

Computational Biology

In-vivo. In-Silico.

89 views • 1 slides