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Achieving 3-D Literacy

This resource highlights the integration of advanced molecular modeling and visualization software in education. Tools such as Cn3D, Mage/Kinemage, and SwissPDB Viewer allow students to explore and understand molecular structures, chemical properties, and gene-protein relationships effectively. Reports indicate that utilizing these technologies in teaching has significantly improved student comprehension of complex biological concepts. Additionally, the resource includes information about traditional models and lending libraries, providing comprehensive support for educators at Beloit College and beyond.

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Achieving 3-D Literacy

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  1. Achieving 3-D Literacy Tia Johnson Beloit College

  2. Tools for Teaching • Hardware • Software • Accessories

  3. Molecular Modeling and Visualization Software • Cn3D, NCBI • Mage/Kinemage, Duke • SwissPDB Viewer (DeepView) • WebMol, UC San Francisco • Chime, MDL Information Systems • Protein Explorer and RasMol (RasTop, GeneInfinity), U. Mass.

  4. Accessories • Traditional models • Center for BioMolecular Modeling • MSOE Lending Library

  5. TRP Cage • 20-residue protein • Truncated from exendin-4 • Protein Data Bank • TRP Cage Problem Space

  6. Reports have shown students feel they have a better understanding of molecular structure, chemical properties and interactions, and gene-protein relationship after using molecular visualization software in their classes.

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