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Grid Interface for Slicer3: Make Slicer 3 work on a set of clusters.

2007 Project Half Week. Grid Interface for Slicer3: Make Slicer 3 work on a set of clusters. Plan/Expected Challenges/Publication. Team. Algorithms:. (algorithms) Neil Jones, UCSD (software) (contact) Jeff Grethe, UCSD (software) Steve Pieper, Isomics (Slicer) Bill Lorenson, GE (CLI)

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Grid Interface for Slicer3: Make Slicer 3 work on a set of clusters.

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  1. 2007 Project Half Week Grid Interface for Slicer3:Make Slicer 3 work on a set of clusters. Plan/Expected Challenges/Publication Team Algorithms: (algorithms) Neil Jones, UCSD (software) (contact) Jeff Grethe, UCSD (software) Steve Pieper, Isomics (Slicer) Bill Lorenson, GE (CLI) Jim Miller, GE (CLI) (clinical) Define Slicer/Gwiz interface, calling protocol, polling interface Identify necessary changes to Slicer3 (e.g., password collection?) Work on existing code-level issues (e.g., code redesign) Identify minimum protocol set (e.g., GSI, ssh keys, condor, sge) Agree on delivery schedule Deliverables: UML for SPI, XML schemas, project plan with milestones Clinical: Accomplished by end of Programming Week Discussed using BatchMake as an underlying grid execution technology Agreed on an overall workflow for running tasks on a grid Code improvements to GridWizard Grid XML work descriptor Slicer + Execution model

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