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GADS*: Using Web Services to access large data sets

GADS*: Using Web Services to access large data sets. Jon Blower, Keith Haines, Chunlei Liu, Andrew Woolf, Kecheng Liu, Adit Santokhee, Ying Zhao. * Grid Access Data Service. Background. Climate scientists have a need to access large datasets: Model data and satellite observations

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GADS*: Using Web Services to access large data sets

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  1. GADS*: Using Web Services to access large data sets Jon Blower, Keith Haines, Chunlei Liu, Andrew Woolf, Kecheng Liu, Adit Santokhee, Ying Zhao * Grid Access Data Service

  2. Background • Climate scientists have a need to access large datasets: • Model data and satellite observations • Data in a variety of formats (netCDF, HDF, GRIB, more), grids, naming conventions • Model intercomparisons (MERSEA) • Existing standards (DODS/OPeNDAP) are limited

  3. Working with large data sets • Subset / resample • Transform / regrid / rotate • Analyse • Compare

  4. Background (2) • Woolf et al (2003) presented a prototype version of GADS as an alternative to DODS • Developed as part of GODIVA (NERC eScience pilot project)

  5. Advantages of GADS • Data are abstracted from storage • Data can be exposed with standard variable names, even if data files do not conform to standards • Data can be delivered in many formats, irrespective of internal storage format • Behaves as aggregation server • Deployed as Web Service • Platform – independent • Compatible with current eScience advances

  6. GODIVA Web Portal • Allows users to interactively select data for download using a GUI • Users can create movies on the fly • cf. Live Access Server

  7. GADS Methods • dataQuery is used for querying the data holdings, e.g. “What datasets are there?”, “What variables are contained in the X dataset?” • dataRequest is used to download data • Can easily extract subsets of data

  8. Recent Enhancements • More portable (now works on Linux) • More flexible and extensible (object oriented code) • Improved metadata handling: • Metadata manager • Metadata loosely coupled from rest of system, so many different representations (e.g. XML, mySQL) are possible.

  9. GADS Web Service dataQuery dataRequest Client Metadata Manager Utility Metadata Web Service META- DATA DATA FILES Architecture

  10. Metadata manager

  11. Workflows • As a Web Service, GADS can be incorporated into workflows (aka orchestration, choreography) • See presentation by Sastry and Craig of RAL • A few standards and fewer tools are available (BPEL4WS, WSCI, SCUFL, LabVIEW) • Question: How pass around large data sets? • Don’t pass data, pass pointers, e.g. URLs?

  12. Example workflow Scufl Workbench (myGrid project) http://taverna.sourceforge.net • GADS is used as the data extraction step in a simple data processing workflow • The other web surface is finding the depth of an isotherm in the dataset

  13. … the result • reference GODIVA, understanding of THC, heat budgets

  14. Future plans • Potential deployment at SOC, POL, Met Office, ECMWF… • Use document-style SOAP for richer queries, e.g. “What datasets contain salinity measurements in the South Atlantic?” • More output formats (GRIB, VTK?) • Long-term migration path towards Grid Services • Asynchronous notification of, e.g. progress

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