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Analysis of Overrepresented Cis-Regulatory Motifs in 5' Upstream Regions

This study explores the significance of cis-regulatory binding motifs located in the 5' upstream regions of genes. We assess the occurrence of these motifs and compare them to expected occurrences to determine their overrepresentation. Key metrics include the observed number of occurrences, the expected number, and the probability of finding motifs with the same overrepresentation. Understanding these motifs is crucial for unraveling gene regulation mechanisms and their implications in biological processes.

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Analysis of Overrepresented Cis-Regulatory Motifs in 5' Upstream Regions

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  1. Table 3: 5’ upstream cis-regulatory motif • Significantly overrepresented cis-regulatory binding motifs in 5’ upstream regions. • occ= number of occurrences • Expected occ= expected number of occurrences • occ E= the probability of find number of patterns with same overrepresentation

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