'Flybase' diaporamas de présentation

The Seven Deadly Sins of Bioinformatics

The Seven Deadly Sins of Bioinformatics. Professor Carole Goble carole.goble@manchester.ac.uk The University of Manchester, UK The myGrid project http://www.mygrid.org.uk myExperiment http://myexperiment.org OMII-UK http://www.omii.ac.uk.

911 views • 77 slides

The GMOD Project

The GMOD Project. Lincoln Stein Cold Spring Harbor Laboratory. Test Subject: Michael Caudy. Drosophila neurobiologist Proneural differentiation notch pathway HLH transcriptional activators/repressors achaete/scute complex No computer science training

756 views • 60 slides

Other biological databases

Other biological databases. Biological systems. Sequence data. Protein folding and 3D structure. Taxonomic data Literature. Pathways and networks. Protein families and domains. Small molecules. Whole genome data. Ontologies -GO. Biological systems. Other Biological Databases.

605 views • 43 slides

Bioinformatics Methods for Inheriting Structural and Functional annotations for Gene Sequences

Bioinformatics Methods for Inheriting Structural and Functional annotations for Gene Sequences. if a related sequence has a known function can you inherit functional properties if a related sequence has a known structure, can you model the unknown structure using the known?

484 views • 38 slides

A Functional Genomics Approach to Autophagic Cell Death Gene Discovery

CATGGCGTGGGGAT CATGGCTAATAAAT CATGGCTCAAGGAG CATGGCTGGACTCC CATGGCTGTGGCCA CATGGCTTTCGTGT CATGGCTTTTTGGC CATGGGAACCGACA CATGGGACCGCCCC CATGGGACCGCTCA CATGGGATCACAAT CATGGGCAACGATC CATGGGCAGCAAGC CATGGGCAGCAATT. A Functional Genomics Approach to Autophagic Cell Death Gene Discovery.

437 views • 35 slides

Chado for evolutionary science

Chado for evolutionary science. Chris Mungall HHMI (until June) National Center for Biomedical Ontologies (after June). Outline. Chado key concepts Chado selected module tour sequence : genome annotations cv : ontologies and terminologies phylogeny : evolutionary trees

415 views • 33 slides

Functional Annotation and Functional Enrichment

543 views • 30 slides

BeeSpace: An Interactive Environment for Functional Analysis of Social Behavior

BeeSpace: An Interactive Environment for Functional Analysis of Social Behavior. Bruce Schatz, Principal Investigator Graduate School of Library & Information Science (GSLIS) Department of Computer Science, Program in Neuroscience schatz@uiuc.edu , www.canis.uiuc.edu

368 views • 29 slides

Madey, G.R., Cabaniss, S.E., Maurice, P.A., Xiang, X., Arthurs, L., Kennedy, R., Huang, Y

Online Collaboratory for NOM Research: Agent-based Simulations, Data-Mining, and Knowledge-Discovery. Madey, G.R., Cabaniss, S.E., Maurice, P.A., Xiang, X., Arthurs, L., Kennedy, R., Huang, Y University of Notre Dame University of New Mexico ASLO 2005 February 24, 2005. Overview.

351 views • 26 slides

407 views • 25 slides

Mining Genomes - Tools of the Trade

244 views • 24 slides

Browsing Genes and Genomes with Ensembl Genome Browser

Mamoona Mushtaq: mamoona.mushtaq@hgen.slu.se Saima Zubair: saima.zubair@hgen.slu.se Department of Animal Breeding and genetics. Browsing Genes and Genomes with Ensembl Genome Browser. Introduction Interactive tutorial Assignment. Outline. Ensembl Genome browser http://www.ensembl.org

756 views • 23 slides

The FlyBase Consortium: Harvard University University of Bloomington-Indiana

The FlyBase Consortium: Harvard University University of Bloomington-Indiana University of California-Berkeley Cambridge University. FlyBase includes 78,804 named alleles of 19,053 Drosophilid genes C LASSICAL A LLELES 61,286 e.g. sty S73 (EMS) G ENETICALLY E NGINEERED A LLELES

343 views • 22 slides

DECIPHERING THE HISTONE CODE

DECIPHERING THE HISTONE CODE. E NRIQUE B LANCO. NUMBER OF SLIDES: 21 EXPECTED TIME: 25 minutes. TRANSCRIPTIONAL REGULATION. GENE REGULATORY ARCHITECTURE. Gene regulation can be coordinated in the genome into different levels: Individual genes Chromosomal domains Entire chromosomes

378 views • 21 slides

FlyWeb: the way to go for biological data integration

274 views • 21 slides

The chado genetics module

The chado genetics module. new and improved. V. GMOD Meeting 4/26/2004 Cambridge, MA. David Emmert FlyBase - Harvard emmert@morgan.harvard.edu. chado module dependencies. organism. general (dbxref). map. pub. sequence. genetic. expression. cv. companalysis. gcontext_id

310 views • 19 slides

Biological Annotation in R

Biological Annotation in R. Manchester R, 13th Nov, 2013 Nick Burgoyne Bioinformatician , fiosgenomics njburgoyne@hotmail.com nick.burgoyne@fiosgenomics.com. Bioinformatics. Information management in biology Application of statistics to experimental data Creation of databases to store it

226 views • 16 slides

Genome Browsers

Genome Browsers. Artemis. Annotation platform used by Sanger Institute Pathogen group Can be used as a visualization tool Capable of reading EMBL/GenBank and GFF files Built in database entry fetching facility Designed for bacterial genomes Used for small eukaryotes

189 views • 6 slides