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Problems of Genome Assembly

Problems of Genome Assembly. James Yorke and Aleksey Zimin University of Maryland, College Park. WGS sequencing. Multiple copies of DNA. Fragments of 200 - 200,000 bases. No information is retained on which part of the DNA the fragments came from. WGS sequencing: fragments.

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273 views • 23 slides

The Genome Assemblies of Tasmanian Devil

The Genome Assemblies of Tasmanian Devil. Zemin Ning The Wellcome Trust Sanger Institute. Outline of the Talk:. The Phusion2 pipeline Flow-sorting sequencing Assigning contigs to individual chromosomes The Devil genome assembly Future work. Phusion2 Assembly Pipeline. Assembly.

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371 views • 16 slides

Steps in a genome sequencing project

Steps in a genome sequencing project. Funding and sequencing strategy source of funding identified / community drive development of sequencing strategy random shotgun (chromosome &amp; whole genome)

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660 views • 15 slides

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