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www.wwpdb.org

www.wwpdb.org

www.wwpdb.org. September 7, 2007. Agenda. Welcome and introductions Accomplishments Remediation rollout summary Toward the future Break Matters arising Incorrect structures Executive session Feedback to wwPDB Set next meeting date.

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627 views • 47 slides
PDBeChem

PDBeChem

PDBeChem. The Ligand Database. Why PDBeChem?. Link between protein and chemistry Reference dictionary for the chemical definition of 3 letter coded single residues in the PDB (wwPDB CCD)

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320 views • 18 slides
Using Metacomputing Tools to Facilitate Large Scale Analyses of Biological Databases

Using Metacomputing Tools to Facilitate Large Scale Analyses of Biological Databases

Using Metacomputing Tools to Facilitate Large Scale Analyses of Biological Databases. Vinay D. Shet CMSC 838 Presentation Authors: Allison Waugh, Glenn A. Williams, Liping Wei, and Russ B. Altman. Motivation. Biological databases are growing at a very high rate

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307 views • 16 slides
Chemistry & the PDB MSDchem

Chemistry & the PDB MSDchem

Chemistry & the PDB MSDchem. Primary Developer: Dimitris Dimitropoulos. The chemical database. MSDchem ligand dictionary. Complete, clean, up to date collection of all the chemical species and small molecules in the PDB

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260 views • 16 slides
Chemical Components Dictionary

Chemical Components Dictionary

Chemical Components Dictionary. Marina Zhuravleva, RCSB PDB June 16, 2011. Crystallographic Databases. PDB http://www.wwpdb.org/ macromolecular structural data (biopolymers) CCDC http://www.ccdc.cam.ac.uk small molecules database (organic, metal-organic) ICSD http://icsd.ill.eu/icsd/

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249 views • 10 slides
Protein-Protein Interaction in the Rho-RhoGAP Complex

Protein-Protein Interaction in the Rho-RhoGAP Complex

Protein-Protein Interaction in the Rho-RhoGAP Complex Eno Akpovwa, Paul Craig, Herbert Bernstein, Rochester Institute of Technology, Rochester, NY and Dowling College, Oakdale, NY. Abstract. Results. Results.

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94 views • 1 slides

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