'Protein interaction networks' diaporamas de présentation

Introduction to Network Theory: Basic Concepts

Introduction to Network Theory: Basic Concepts. Ernesto Estrada Department of Mathematics, Department of Physics Institute of Complex Systems at Strathclyde University of Strathclyde www.estradalab.org. What is a Network?. Network = graph

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Lecture 4 Protein Function prediction using network concepts

Lecture 4 Protein Function prediction using network concepts Application of network concepts in DNA sequencing. Topology of Protein-protein interaction is informative but further analysis can reveal other information.

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Introduction to complex networks Part II: Models

Introduction to complex networks Part II: Models. NetSci 2010 Boston, May 10 2010. Ginestra Bianconi Physics Department,Northeastern University, Boston,USA. Random graphs. G(N,L) ensemble Graphs with exactly N nodes and L links. G(N,p) ensemble Graphs with N nodes

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Biological networks Construction and Analysis

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Statistical mechanics approach to complex networks: from abstract to

Statistical mechanics approach to complex networks: from abstract to. biological networks. Vittoria Colizza Supervisor: Prof. Amos Maritan. biological networks. Protein-protein Interaction Networks. Outline. PIN Methods Topological analysis Renormalization

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Biological networks Construction and Analysis

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QNET: A tool for querying protein interaction networks

QNET: A tool for querying protein interaction networks. Banu Dost + , Tomer Shlomi*, Nitin Gupta + , Eytan Ruppin*, Vineet Bafna + , Roded Sharan* + University of California, San Diego *Tel Aviv University, Israel contact: bdost@cs.ucsd.edu. Protein Interaction Networks.

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Protein-protein interactions

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Modeling Functional Genomics Datasets CVM8890-101

Modeling Functional Genomics Datasets CVM8890-101. Lesson 6 11 July 2007 Bindu Nanduri. Lesson 6: Functional genomics modeling II: a pathway analysis example. Introduction to protein interaction networks. Cancer. Programmed Cell Death. Proliferation. Cell. Quiescence. Differentiation.

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Network Wrap-Up

Network Wrap-Up. No lecture Tuesday next week (10.2.) Questions about lectures 1-12 on 12.2. Questions about lectures 13-25 on 17.2. Questions about assignments on 17.2. today: review network topologies (Barabasi & Oltvai, Nature Reviews Genetics 5, 101 (2004))

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TORQUE: Topology-Free Querying of Protein Interaction Networks

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Fast Jensen-Shannon Graph Kernel

Fast Jensen-Shannon Graph Kernel. Bai Lu and Edwin Hancock Department of Computer Science University of York. Supported by a Royal Society Wolfson Research Merit Award. Structural Variations. Protein-Protein Interaction Networks. Manipulating graphs.

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Modelling, comparison, and analysis of proteomes Ram Samudrala University of Washington

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