'Quality values' diaporamas de présentation

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Read mapping and variant calling in human short-read DNA sequences

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Next-generation sequence analysis

Next-generation sequence analysis. Gabor T. Marth Boston College Biology Department PSB 2008 January 4-8. 2008. Read length and throughput. Illumina/Solexa, AB/SOLiD short-read sequencers. 1Gb. (1-4 Gb in 25-50 bp reads). bases per machine run. 100 Mb. 454 pyrosequencer.

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Whole Genome Shotgun Assembly

Whole Genome Shotgun Assembly. Two strategies for sequencing: clone-by-clone approach whole-genome shotgun approach (Celera, Gene Myers). Shotgun sequencing was introduced by F. Sanger et al. (1977) and has remained the mainstay of genome sequence assembly for nearly 25 years now.

1.19k views • 45 slides

Green Mountain National Forest Wilderness : An Enduring Resource

Green Mountain National Forest Wilderness : An Enduring Resource. What We Will Do :. Lay out the locations and some of the highlights of the six Green Mountain National Forest Wilderness areas. Discover the public purposes of wilderness.

761 views • 41 slides

A Data Quality Screening Service for Remote Sensing Data

A Data Quality Screening Service for Remote Sensing Data. Christopher Lynnes, NASA/GSFC Edward Olsen, NASA/JPL Peter Fox, RPI Bruce Vollmer, NASA/GSFC Robert Wolfe, NASA/GSFC Shahin Samadi , NASA/GSFC.

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Phred / Phrap /Consed Genome/Sequence Assembly

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Next Gen Sequencing Data

Next Gen Sequencing Data. The FASTQ file format is the current standard for next generation sequencer output. This is the format for the Illumina Genome Analyzer. FASTQ Format . ASCII text No standard file extension: but .fq .fastq and .txt are commonly used 4 lines per sequence

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Group 3. Evaluation cultures in TED Issues and recommendations

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