'Secondary structures' diaporamas de présentation

Computational Molecular Biology

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OPTION C: Cells and Energy

Topic 8 : Cell respiration and Photosynthesis. AND. OPTION C: Cells and Energy. C1: Proteins. C.1.1:Primary Structure. C.1.1: Secondary Structures. Alpha Helix Beta Pleated Sheet. protein ribbonprotein ribbon. 7.5.1: Quaternary Structure.

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Structural Bioinformatics

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Chapter 5: Outline

Chapter 5: Outline. Amino Acids Amino acid classes Stereoisomers Bioactive AA Titration of AA Modified AA AA reactions Peptides Proteins (We are here) Protein structure Fibrous proteins Globular proteins. Protein Function. Catalysis 2. Structure 3. Movement 4. Defense

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Tertiary Structure Prediction

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Genome Assembly and Finishing Alla Lapidus, Ph.D. Associate Professor Fox Chase Cancer Center

Genome Assembly and Finishing Alla Lapidus, Ph.D. Associate Professor Fox Chase Cancer Center. A typical Microbial (and not only) project. Sequencing. Draft assembly . Goals: Completely restore genome Produce high quality consensus. FINISHING . Annotation. Public release.

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Genome Assembly and Finishing Alla Lapidus, Ph.D. Associate Professor Fox Chase Cancer Center

Genome Assembly and Finishing Alla Lapidus, Ph.D. Associate Professor Fox Chase Cancer Center. A typical Microbial (and not only) project. Sequencing. Draft assembly . Goals: Completely restore genome Produce high quality consensus. FINISHING . Annotation. Public release.

507 views • 36 slides

Proteins: structure, translation, etc.

Proteins: structure, translation, etc. 2-1. Structure of proteins - amino acids, peptide bond, primary-quaternary structures, disulfide bond Protein synthesis protein translation, co-translational folding, stalling, etc. Protein folding and unfolding

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Outline

Outline. Nucleic Acids Basics The Problem of Predicting Nucleic Acid Structure Thermodynamics and Phylogeny Comparison A commonly used program for predicting RNA secondary structure---mFOLD Predicting RNA Tertiary Structures by Mc-Sym. Biological Functions of Nucleic Acids.

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Lecture 1: Fundamentals of Protein Structure

Lecture 1: Fundamentals of Protein Structure. Levels of Protein Structure. Primary structure = order of amino acids in the protein chain. Anatomy of an amino acid. Non-polar amino acids. Polar, non-charged amino acids. Negatively-charged amino acids. Positively-charged amino acids.

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Protein Structure Prediction

Protein Structure Prediction. Historical Perspective. Protein Folding: From the Levinthal Paradox to Structure Prediction, Barry Honig, 1999 A personal perspective on advances and developments in protein folding over the last 40 years. Levinthal Paradox.

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Biomolecules: Peptides and Proteins

Biomolecules: Peptides and Proteins. Lecture 5, Medical Biochemistry. Lecture 5 Outline. Overview of amino acids, peptides and the peptide bond Discuss the levels of protein structure Describe techniques used for analysis of proteins.

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Mining the Genome

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Principles of Protein Structure

Principles of Protein Structure . PHAR 201/Bioinformatics I Philip E. Bourne School of Pharmacy & Pharm. Sci., UCSD Prerequisite Reading: Structural Bioinformatics Chapters 1-2 Thanks to Eric Scheeff and Lynn Fink. Remember .

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mRNA secondary structure optimization using a correlated stem-loop prediction

mRNA secondary structure optimization using a correlated stem-loop prediction. Nucleic Acids Res. 2013 Apr 1;41(6):e73. doi : 10.1093/ nar /gks1473. Epub 2013 Jan 15. Presented by WONG Pak Kan. Agenda. Background Motivation Methodology Results Discussion.

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Protein

Protein . Amino Acids: Monomers of Proteins. A protein is a macromolecule that is made of monomers called Amino acids Amino acids have an Amino group, Carboxyl group, a Hydrogen atom, and a Carbon chain, all connected to a central Carbon atom. Amino Acids: Monomers of Proteins.

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Biological Molecules

Biological Molecules. Protein Structure. First Five. Compare and Contrast: Triglyceride & Phospholipid. Proteins are Important. Proteins can serve many functions because they are diverse in size, shape, and chemical properties. Rhodopsin. Collagen. Protein Structure.

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BITO-111 BIOTECHNOLOGY

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V3 Loop Binding to CCR5 and CXCR4 of Rapid and Non Progressor HIV Patients in Baltimore MD

V3 Loop Binding to CCR5 and CXCR4 of Rapid and Non Progressor HIV Patients in Baltimore MD. Background. V3 loop of gp120. CCR5 and CXCR4 Receptor.

107 views • 1 slides